co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
2	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
3	GO:0032515: negative regulation of phosphoprotein phosphatase activity	0.00E+00
4	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
5	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
6	GO:0006983: ER overload response	0.00E+00
7	GO:0043066: negative regulation of apoptotic process	2.86E-06
8	GO:0009863: salicylic acid mediated signaling pathway	7.28E-05
9	GO:0031930: mitochondria-nucleus signaling pathway	1.37E-04
10	GO:0042742: defense response to bacterium	2.32E-04
11	GO:0042539: hypotonic salinity response	2.48E-04
12	GO:0034975: protein folding in endoplasmic reticulum	2.48E-04
13	GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway	2.48E-04
14	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.48E-04
15	GO:0006562: proline catabolic process	2.48E-04
16	GO:0032469: endoplasmic reticulum calcium ion homeostasis	2.48E-04
17	GO:0032491: detection of molecule of fungal origin	2.48E-04
18	GO:0010112: regulation of systemic acquired resistance	3.41E-04
19	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.05E-04
20	GO:0080183: response to photooxidative stress	5.49E-04
21	GO:0010155: regulation of proton transport	5.49E-04
22	GO:0010133: proline catabolic process to glutamate	5.49E-04
23	GO:0080185: effector dependent induction by symbiont of host immune response	5.49E-04
24	GO:1902066: regulation of cell wall pectin metabolic process	5.49E-04
25	GO:0002240: response to molecule of oomycetes origin	5.49E-04
26	GO:0031349: positive regulation of defense response	5.49E-04
27	GO:0045732: positive regulation of protein catabolic process	5.49E-04
28	GO:0019725: cellular homeostasis	5.49E-04
29	GO:0006499: N-terminal protein myristoylation	7.01E-04
30	GO:0009266: response to temperature stimulus	7.98E-04
31	GO:0045836: positive regulation of meiotic nuclear division	8.92E-04
32	GO:0015783: GDP-fucose transport	8.92E-04
33	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	8.92E-04
34	GO:1901672: positive regulation of systemic acquired resistance	8.92E-04
35	GO:0048586: regulation of long-day photoperiodism, flowering	8.92E-04
36	GO:0032922: circadian regulation of gene expression	8.92E-04
37	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.92E-04
38	GO:0006986: response to unfolded protein	1.27E-03
39	GO:0009152: purine ribonucleotide biosynthetic process	1.27E-03
40	GO:0010104: regulation of ethylene-activated signaling pathway	1.27E-03
41	GO:0072583: clathrin-dependent endocytosis	1.27E-03
42	GO:0006537: glutamate biosynthetic process	1.27E-03
43	GO:0010731: protein glutathionylation	1.27E-03
44	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.44E-03
45	GO:0009737: response to abscisic acid	1.50E-03
46	GO:0006486: protein glycosylation	1.66E-03
47	GO:0045227: capsule polysaccharide biosynthetic process	1.70E-03
48	GO:0033358: UDP-L-arabinose biosynthetic process	1.70E-03
49	GO:0007112: male meiosis cytokinesis	1.70E-03
50	GO:0018344: protein geranylgeranylation	2.17E-03
51	GO:0009247: glycolipid biosynthetic process	2.17E-03
52	GO:0045927: positive regulation of growth	2.17E-03
53	GO:0006468: protein phosphorylation	2.26E-03
54	GO:0009620: response to fungus	2.32E-03
55	GO:0002238: response to molecule of fungal origin	2.67E-03
56	GO:0001731: formation of translation preinitiation complex	2.67E-03
57	GO:0045962: positive regulation of development, heterochronic	2.67E-03
58	GO:0010337: regulation of salicylic acid metabolic process	2.67E-03
59	GO:0018105: peptidyl-serine phosphorylation	2.70E-03
60	GO:0010200: response to chitin	2.71E-03
61	GO:0009738: abscisic acid-activated signaling pathway	2.76E-03
62	GO:0007264: small GTPase mediated signal transduction	2.82E-03
63	GO:0009414: response to water deprivation	2.86E-03
64	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.21E-03
65	GO:0000911: cytokinesis by cell plate formation	3.21E-03
66	GO:0009423: chorismate biosynthetic process	3.21E-03
67	GO:0045926: negative regulation of growth	3.21E-03
68	GO:0006904: vesicle docking involved in exocytosis	3.40E-03
69	GO:0046470: phosphatidylcholine metabolic process	3.79E-03
70	GO:1900057: positive regulation of leaf senescence	3.79E-03
71	GO:0045010: actin nucleation	4.39E-03
72	GO:0031540: regulation of anthocyanin biosynthetic process	4.39E-03
73	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.39E-03
74	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.39E-03
75	GO:0030162: regulation of proteolysis	4.39E-03
76	GO:0006491: N-glycan processing	4.39E-03
77	GO:0019375: galactolipid biosynthetic process	4.39E-03
78	GO:0030968: endoplasmic reticulum unfolded protein response	5.03E-03
79	GO:0006972: hyperosmotic response	5.03E-03
80	GO:0009932: cell tip growth	5.03E-03
81	GO:0010204: defense response signaling pathway, resistance gene-independent	5.03E-03
82	GO:0006189: 'de novo' IMP biosynthetic process	5.70E-03
83	GO:0015780: nucleotide-sugar transport	5.70E-03
84	GO:0006470: protein dephosphorylation	6.18E-03
85	GO:0009867: jasmonic acid mediated signaling pathway	6.30E-03
86	GO:1900426: positive regulation of defense response to bacterium	6.40E-03
87	GO:0043067: regulation of programmed cell death	6.40E-03
88	GO:0030042: actin filament depolymerization	6.40E-03
89	GO:0048268: clathrin coat assembly	6.40E-03
90	GO:0043069: negative regulation of programmed cell death	7.12E-03
91	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.12E-03
92	GO:0006897: endocytosis	7.49E-03
93	GO:0000038: very long-chain fatty acid metabolic process	7.88E-03
94	GO:0009089: lysine biosynthetic process via diaminopimelate	7.88E-03
95	GO:0009073: aromatic amino acid family biosynthetic process	7.88E-03
96	GO:0018107: peptidyl-threonine phosphorylation	9.47E-03
97	GO:0006829: zinc II ion transport	9.47E-03
98	GO:0006626: protein targeting to mitochondrion	9.47E-03
99	GO:0006812: cation transport	1.02E-02
100	GO:0002237: response to molecule of bacterial origin	1.03E-02
101	GO:0007034: vacuolar transport	1.03E-02
102	GO:0006446: regulation of translational initiation	1.03E-02
103	GO:0070588: calcium ion transmembrane transport	1.12E-02
104	GO:0046854: phosphatidylinositol phosphorylation	1.12E-02
105	GO:0009225: nucleotide-sugar metabolic process	1.12E-02
106	GO:0034976: response to endoplasmic reticulum stress	1.21E-02
107	GO:0006487: protein N-linked glycosylation	1.30E-02
108	GO:0045333: cellular respiration	1.30E-02
109	GO:0046777: protein autophosphorylation	1.30E-02
110	GO:0080147: root hair cell development	1.30E-02
111	GO:0043622: cortical microtubule organization	1.39E-02
112	GO:0006952: defense response	1.43E-02
113	GO:0051321: meiotic cell cycle	1.49E-02
114	GO:0045454: cell redox homeostasis	1.50E-02
115	GO:0031348: negative regulation of defense response	1.59E-02
116	GO:0006396: RNA processing	1.61E-02
117	GO:0006012: galactose metabolic process	1.69E-02
118	GO:0016310: phosphorylation	1.72E-02
119	GO:0009306: protein secretion	1.79E-02
120	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.90E-02
121	GO:0009751: response to salicylic acid	1.92E-02
122	GO:0009408: response to heat	1.96E-02
123	GO:0006885: regulation of pH	2.12E-02
124	GO:0009845: seed germination	2.13E-02
125	GO:0048544: recognition of pollen	2.23E-02
126	GO:0006464: cellular protein modification process	2.82E-02
127	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.03E-02
128	GO:0051607: defense response to virus	3.07E-02
129	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.32E-02
130	GO:0010029: regulation of seed germination	3.32E-02
131	GO:0009816: defense response to bacterium, incompatible interaction	3.32E-02
132	GO:0009627: systemic acquired resistance	3.46E-02
133	GO:0009817: defense response to fungus, incompatible interaction	3.86E-02
134	GO:0010043: response to zinc ion	4.28E-02
135	GO:0007568: aging	4.28E-02
136	GO:0009631: cold acclimation	4.28E-02
137	GO:0035556: intracellular signal transduction	4.28E-02
138	GO:0006970: response to osmotic stress	4.50E-02
139	GO:0048366: leaf development	4.91E-02
140	GO:0009409: response to cold	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0004644: phosphoribosylglycinamide formyltransferase activity	0.00E+00
2	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
3	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
4	GO:0005522: profilin binding	0.00E+00
5	GO:0050220: prostaglandin-E synthase activity	0.00E+00
6	GO:0004865: protein serine/threonine phosphatase inhibitor activity	0.00E+00
7	GO:0004107: chorismate synthase activity	0.00E+00
8	GO:0005212: structural constituent of eye lens	0.00E+00
9	GO:0016301: kinase activity	1.47E-04
10	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.48E-04
11	GO:0032050: clathrin heavy chain binding	2.48E-04
12	GO:1901149: salicylic acid binding	2.48E-04
13	GO:0004662: CAAX-protein geranylgeranyltransferase activity	2.48E-04
14	GO:0004657: proline dehydrogenase activity	2.48E-04
15	GO:0046481: digalactosyldiacylglycerol synthase activity	2.48E-04
16	GO:0015035: protein disulfide oxidoreductase activity	4.36E-04
17	GO:0048531: beta-1,3-galactosyltransferase activity	5.49E-04
18	GO:0005509: calcium ion binding	7.29E-04
19	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	8.92E-04
20	GO:0008864: formyltetrahydrofolate deformylase activity	8.92E-04
21	GO:0005457: GDP-fucose transmembrane transporter activity	8.92E-04
22	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.27E-03
23	GO:0035250: UDP-galactosyltransferase activity	1.27E-03
24	GO:0009916: alternative oxidase activity	1.70E-03
25	GO:0050373: UDP-arabinose 4-epimerase activity	1.70E-03
26	GO:0004040: amidase activity	2.17E-03
27	GO:0004656: procollagen-proline 4-dioxygenase activity	3.21E-03
28	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.21E-03
29	GO:0004559: alpha-mannosidase activity	3.21E-03
30	GO:0003978: UDP-glucose 4-epimerase activity	3.21E-03
31	GO:0003730: mRNA 3'-UTR binding	3.21E-03
32	GO:0004722: protein serine/threonine phosphatase activity	3.90E-03
33	GO:0005524: ATP binding	3.92E-03
34	GO:0008375: acetylglucosaminyltransferase activity	4.26E-03
35	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.26E-03
36	GO:0004525: ribonuclease III activity	4.39E-03
37	GO:0004683: calmodulin-dependent protein kinase activity	4.49E-03
38	GO:0004630: phospholipase D activity	5.03E-03
39	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.03E-03
40	GO:0004430: 1-phosphatidylinositol 4-kinase activity	5.03E-03
41	GO:0005545: 1-phosphatidylinositol binding	7.12E-03
42	GO:0004713: protein tyrosine kinase activity	7.12E-03
43	GO:0008559: xenobiotic-transporting ATPase activity	7.88E-03
44	GO:0005543: phospholipid binding	7.88E-03
45	GO:0008378: galactosyltransferase activity	8.66E-03
46	GO:0031072: heat shock protein binding	9.47E-03
47	GO:0005262: calcium channel activity	9.47E-03
48	GO:0005388: calcium-transporting ATPase activity	9.47E-03
49	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.47E-03
50	GO:0004674: protein serine/threonine kinase activity	1.08E-02
51	GO:0031625: ubiquitin protein ligase binding	1.22E-02
52	GO:0031418: L-ascorbic acid binding	1.30E-02
53	GO:0051087: chaperone binding	1.39E-02
54	GO:0008324: cation transmembrane transporter activity	1.39E-02
55	GO:0004707: MAP kinase activity	1.49E-02
56	GO:0003779: actin binding	1.52E-02
57	GO:0003756: protein disulfide isomerase activity	1.79E-02
58	GO:0003676: nucleic acid binding	1.84E-02
59	GO:0005451: monovalent cation:proton antiporter activity	2.01E-02
60	GO:0005516: calmodulin binding	2.06E-02
61	GO:0046873: metal ion transmembrane transporter activity	2.12E-02
62	GO:0030276: clathrin binding	2.12E-02
63	GO:0009055: electron carrier activity	2.14E-02
64	GO:0015299: solute:proton antiporter activity	2.23E-02
65	GO:0010181: FMN binding	2.23E-02
66	GO:0004872: receptor activity	2.34E-02
67	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.53E-02
68	GO:0046872: metal ion binding	2.55E-02
69	GO:0015385: sodium:proton antiporter activity	2.70E-02
70	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.70E-02
71	GO:0051015: actin filament binding	2.70E-02
72	GO:0008483: transaminase activity	2.94E-02
73	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.44E-02
74	GO:0004004: ATP-dependent RNA helicase activity	3.59E-02
75	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.72E-02
76	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.56E-02
77	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.80E-02
78	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0005911: cell-cell junction	2.48E-04
2	GO:0005953: CAAX-protein geranylgeranyltransferase complex	2.48E-04
3	GO:0030139: endocytic vesicle	8.92E-04
4	GO:0005635: nuclear envelope	1.81E-03
5	GO:0000164: protein phosphatase type 1 complex	2.17E-03
6	GO:0016282: eukaryotic 43S preinitiation complex	2.67E-03
7	GO:0033290: eukaryotic 48S preinitiation complex	3.21E-03
8	GO:0005654: nucleoplasm	3.34E-03
9	GO:0005783: endoplasmic reticulum	4.20E-03
10	GO:0030125: clathrin vesicle coat	7.12E-03
11	GO:0048471: perinuclear region of cytoplasm	7.88E-03
12	GO:0005737: cytoplasm	1.00E-02
13	GO:0005886: plasma membrane	1.03E-02
14	GO:0005795: Golgi stack	1.12E-02
15	GO:0030176: integral component of endoplasmic reticulum membrane	1.12E-02
16	GO:0070469: respiratory chain	1.39E-02
17	GO:0005905: clathrin-coated pit	1.49E-02
18	GO:0015629: actin cytoskeleton	1.69E-02
19	GO:0000139: Golgi membrane	1.69E-02
20	GO:0030136: clathrin-coated vesicle	1.90E-02
21	GO:0005789: endoplasmic reticulum membrane	2.08E-02
22	GO:0005770: late endosome	2.12E-02
23	GO:0043231: intracellular membrane-bounded organelle	2.22E-02
24	GO:0009504: cell plate	2.34E-02
25	GO:0005794: Golgi apparatus	2.41E-02
26	GO:0000145: exocyst	2.58E-02
27	GO:0005622: intracellular	2.63E-02
28	GO:0071944: cell periphery	2.70E-02
29	GO:0032580: Golgi cisterna membrane	2.82E-02
30	GO:0019005: SCF ubiquitin ligase complex	3.86E-02
31	GO:0009707: chloroplast outer membrane	3.86E-02
32	GO:0000325: plant-type vacuole	4.28E-02
33	GO:0016021: integral component of membrane	4.65E-02