co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009560: embryo sac egg cell differentiation	0.00E+00
2	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
3	GO:0016574: histone ubiquitination	0.00E+00
4	GO:0055122: response to very low light intensity stimulus	0.00E+00
5	GO:0010407: non-classical arabinogalactan protein metabolic process	0.00E+00
6	GO:0002084: protein depalmitoylation	0.00E+00
7	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
8	GO:0046865: terpenoid transport	0.00E+00
9	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
10	GO:0071456: cellular response to hypoxia	7.65E-06
11	GO:0006517: protein deglycosylation	1.48E-05
12	GO:0051707: response to other organism	2.29E-04
13	GO:0000209: protein polyubiquitination	2.45E-04
14	GO:0031123: RNA 3'-end processing	3.02E-04
15	GO:0071076: RNA 3' uridylation	3.02E-04
16	GO:0009700: indole phytoalexin biosynthetic process	3.02E-04
17	GO:0010230: alternative respiration	3.02E-04
18	GO:0002143: tRNA wobble position uridine thiolation	3.02E-04
19	GO:0042868: antisense RNA metabolic process	3.02E-04
20	GO:0098789: pre-mRNA cleavage required for polyadenylation	3.02E-04
21	GO:1902065: response to L-glutamate	3.02E-04
22	GO:0071422: succinate transmembrane transport	6.60E-04
23	GO:1902066: regulation of cell wall pectin metabolic process	6.60E-04
24	GO:0042853: L-alanine catabolic process	6.60E-04
25	GO:0007584: response to nutrient	6.60E-04
26	GO:0043066: negative regulation of apoptotic process	6.60E-04
27	GO:0051252: regulation of RNA metabolic process	6.60E-04
28	GO:0009156: ribonucleoside monophosphate biosynthetic process	6.60E-04
29	GO:0015709: thiosulfate transport	6.60E-04
30	GO:0031204: posttranslational protein targeting to membrane, translocation	6.60E-04
31	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	9.29E-04
32	GO:0015783: GDP-fucose transport	1.07E-03
33	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	1.07E-03
34	GO:0015692: lead ion transport	1.07E-03
35	GO:0060968: regulation of gene silencing	1.07E-03
36	GO:0031022: nuclear migration along microfilament	1.07E-03
37	GO:0080168: abscisic acid transport	1.07E-03
38	GO:0048586: regulation of long-day photoperiodism, flowering	1.07E-03
39	GO:0032922: circadian regulation of gene expression	1.07E-03
40	GO:1901672: positive regulation of systemic acquired resistance	1.07E-03
41	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.07E-03
42	GO:0017006: protein-tetrapyrrole linkage	1.07E-03
43	GO:0010053: root epidermal cell differentiation	1.17E-03
44	GO:0042343: indole glucosinolate metabolic process	1.17E-03
45	GO:0060964: regulation of gene silencing by miRNA	1.53E-03
46	GO:0015729: oxaloacetate transport	1.53E-03
47	GO:0009584: detection of visible light	1.53E-03
48	GO:0010104: regulation of ethylene-activated signaling pathway	1.53E-03
49	GO:0006516: glycoprotein catabolic process	1.53E-03
50	GO:0010731: protein glutathionylation	1.53E-03
51	GO:0002679: respiratory burst involved in defense response	1.53E-03
52	GO:0043967: histone H4 acetylation	1.53E-03
53	GO:0006515: misfolded or incompletely synthesized protein catabolic process	1.53E-03
54	GO:0055089: fatty acid homeostasis	1.53E-03
55	GO:0098542: defense response to other organism	1.74E-03
56	GO:0009636: response to toxic substance	1.89E-03
57	GO:0010363: regulation of plant-type hypersensitive response	2.06E-03
58	GO:0022622: root system development	2.06E-03
59	GO:0010107: potassium ion import	2.06E-03
60	GO:0001709: cell fate determination	2.06E-03
61	GO:0010188: response to microbial phytotoxin	2.06E-03
62	GO:0009902: chloroplast relocation	2.06E-03
63	GO:0009165: nucleotide biosynthetic process	2.06E-03
64	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.08E-03
65	GO:0018344: protein geranylgeranylation	2.63E-03
66	GO:0071423: malate transmembrane transport	2.63E-03
67	GO:0042752: regulation of circadian rhythm	3.05E-03
68	GO:0048544: recognition of pollen	3.05E-03
69	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	3.24E-03
70	GO:0010256: endomembrane system organization	3.24E-03
71	GO:0035435: phosphate ion transmembrane transport	3.24E-03
72	GO:0006623: protein targeting to vacuole	3.27E-03
73	GO:0010193: response to ozone	3.50E-03
74	GO:1900056: negative regulation of leaf senescence	4.60E-03
75	GO:0080186: developmental vegetative growth	4.60E-03
76	GO:2000014: regulation of endosperm development	4.60E-03
77	GO:0008272: sulfate transport	4.60E-03
78	GO:0042742: defense response to bacterium	5.28E-03
79	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.35E-03
80	GO:0006491: N-glycan processing	5.35E-03
81	GO:1900150: regulation of defense response to fungus	5.35E-03
82	GO:0050821: protein stabilization	5.35E-03
83	GO:0009627: systemic acquired resistance	5.66E-03
84	GO:0006002: fructose 6-phosphate metabolic process	6.13E-03
85	GO:0001558: regulation of cell growth	6.13E-03
86	GO:0010120: camalexin biosynthetic process	6.13E-03
87	GO:0030968: endoplasmic reticulum unfolded protein response	6.13E-03
88	GO:0015780: nucleotide-sugar transport	6.95E-03
89	GO:0010112: regulation of systemic acquired resistance	6.95E-03
90	GO:0048589: developmental growth	6.95E-03
91	GO:0009751: response to salicylic acid	7.05E-03
92	GO:0009407: toxin catabolic process	7.29E-03
93	GO:0043067: regulation of programmed cell death	7.80E-03
94	GO:0090332: stomatal closure	7.80E-03
95	GO:0048268: clathrin coat assembly	7.80E-03
96	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.80E-03
97	GO:0008202: steroid metabolic process	7.80E-03
98	GO:0000724: double-strand break repair via homologous recombination	8.01E-03
99	GO:0045087: innate immune response	8.39E-03
100	GO:0043069: negative regulation of programmed cell death	8.70E-03
101	GO:0006816: calcium ion transport	9.63E-03
102	GO:0009089: lysine biosynthetic process via diaminopimelate	9.63E-03
103	GO:0008361: regulation of cell size	1.06E-02
104	GO:0016925: protein sumoylation	1.06E-02
105	GO:0010102: lateral root morphogenesis	1.16E-02
106	GO:0006626: protein targeting to mitochondrion	1.16E-02
107	GO:2000028: regulation of photoperiodism, flowering	1.16E-02
108	GO:0006952: defense response	1.18E-02
109	GO:0007034: vacuolar transport	1.26E-02
110	GO:0006855: drug transmembrane transport	1.27E-02
111	GO:0007030: Golgi organization	1.37E-02
112	GO:0009809: lignin biosynthetic process	1.46E-02
113	GO:0006486: protein glycosylation	1.46E-02
114	GO:0034976: response to endoplasmic reticulum stress	1.48E-02
115	GO:0006636: unsaturated fatty acid biosynthetic process	1.48E-02
116	GO:0006487: protein N-linked glycosylation	1.59E-02
117	GO:0009116: nucleoside metabolic process	1.59E-02
118	GO:0009863: salicylic acid mediated signaling pathway	1.59E-02
119	GO:0006338: chromatin remodeling	1.59E-02
120	GO:0006289: nucleotide-excision repair	1.59E-02
121	GO:0080167: response to karrikin	1.72E-02
122	GO:0006334: nucleosome assembly	1.82E-02
123	GO:0048278: vesicle docking	1.82E-02
124	GO:0031408: oxylipin biosynthetic process	1.82E-02
125	GO:0009626: plant-type hypersensitive response	1.85E-02
126	GO:0010017: red or far-red light signaling pathway	1.95E-02
127	GO:0009814: defense response, incompatible interaction	1.95E-02
128	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.95E-02
129	GO:0030433: ubiquitin-dependent ERAD pathway	1.95E-02
130	GO:0006012: galactose metabolic process	2.07E-02
131	GO:0009625: response to insect	2.07E-02
132	GO:0010584: pollen exine formation	2.20E-02
133	GO:0045492: xylan biosynthetic process	2.20E-02
134	GO:0009306: protein secretion	2.20E-02
135	GO:0000398: mRNA splicing, via spliceosome	2.41E-02
136	GO:0010118: stomatal movement	2.46E-02
137	GO:0009960: endosperm development	2.59E-02
138	GO:0009958: positive gravitropism	2.59E-02
139	GO:0061025: membrane fusion	2.73E-02
140	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.01E-02
141	GO:0002229: defense response to oomycetes	3.01E-02
142	GO:0000302: response to reactive oxygen species	3.01E-02
143	GO:0007264: small GTPase mediated signal transduction	3.16E-02
144	GO:0031047: gene silencing by RNA	3.16E-02
145	GO:0016032: viral process	3.16E-02
146	GO:0008152: metabolic process	3.17E-02
147	GO:1901657: glycosyl compound metabolic process	3.31E-02
148	GO:0006904: vesicle docking involved in exocytosis	3.61E-02
149	GO:0007267: cell-cell signaling	3.61E-02
150	GO:0051607: defense response to virus	3.76E-02
151	GO:0010228: vegetative to reproductive phase transition of meristem	3.77E-02
152	GO:0001666: response to hypoxia	3.92E-02
153	GO:0009816: defense response to bacterium, incompatible interaction	4.07E-02
154	GO:0006906: vesicle fusion	4.24E-02
155	GO:0009617: response to bacterium	4.30E-02
156	GO:0048573: photoperiodism, flowering	4.40E-02
157	GO:0009817: defense response to fungus, incompatible interaction	4.73E-02
158	GO:0018298: protein-chromophore linkage	4.73E-02
159	GO:0008219: cell death	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
2	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
3	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
4	GO:0008092: cytoskeletal protein binding	0.00E+00
5	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
6	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
7	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
8	GO:0050513: glycoprotein 2-beta-D-xylosyltransferase activity	0.00E+00
9	GO:0030621: U4 snRNA binding	0.00E+00
10	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.42E-04
11	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.42E-04
12	GO:0016621: cinnamoyl-CoA reductase activity	2.42E-04
13	GO:1990188: euchromatin binding	3.02E-04
14	GO:1990381: ubiquitin-specific protease binding	3.02E-04
15	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	3.02E-04
16	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.02E-04
17	GO:0050265: RNA uridylyltransferase activity	3.02E-04
18	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.05E-04
19	GO:0016301: kinase activity	5.37E-04
20	GO:0009883: red or far-red light photoreceptor activity	6.60E-04
21	GO:0051879: Hsp90 protein binding	6.60E-04
22	GO:0008428: ribonuclease inhibitor activity	6.60E-04
23	GO:0015117: thiosulfate transmembrane transporter activity	6.60E-04
24	GO:0048531: beta-1,3-galactosyltransferase activity	6.60E-04
25	GO:0004338: glucan exo-1,3-beta-glucosidase activity	6.60E-04
26	GO:1901677: phosphate transmembrane transporter activity	6.60E-04
27	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	6.60E-04
28	GO:0080045: quercetin 3'-O-glucosyltransferase activity	6.60E-04
29	GO:0008378: galactosyltransferase activity	8.22E-04
30	GO:0031624: ubiquitin conjugating enzyme binding	1.04E-03
31	GO:0005457: GDP-fucose transmembrane transporter activity	1.07E-03
32	GO:0005093: Rab GDP-dissociation inhibitor activity	1.07E-03
33	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	1.07E-03
34	GO:0005310: dicarboxylic acid transmembrane transporter activity	1.07E-03
35	GO:0015141: succinate transmembrane transporter activity	1.07E-03
36	GO:0008020: G-protein coupled photoreceptor activity	1.07E-03
37	GO:0017077: oxidative phosphorylation uncoupler activity	1.53E-03
38	GO:0004749: ribose phosphate diphosphokinase activity	1.53E-03
39	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.53E-03
40	GO:0015131: oxaloacetate transmembrane transporter activity	1.53E-03
41	GO:0004792: thiosulfate sulfurtransferase activity	1.53E-03
42	GO:0035251: UDP-glucosyltransferase activity	1.74E-03
43	GO:0015369: calcium:proton antiporter activity	2.06E-03
44	GO:0009916: alternative oxidase activity	2.06E-03
45	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	2.06E-03
46	GO:0015368: calcium:cation antiporter activity	2.06E-03
47	GO:0030246: carbohydrate binding	2.36E-03
48	GO:0017070: U6 snRNA binding	2.63E-03
49	GO:0008641: small protein activating enzyme activity	2.63E-03
50	GO:0008948: oxaloacetate decarboxylase activity	2.63E-03
51	GO:0017137: Rab GTPase binding	2.63E-03
52	GO:0004040: amidase activity	2.63E-03
53	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.63E-03
54	GO:0042285: xylosyltransferase activity	2.63E-03
55	GO:0031386: protein tag	2.63E-03
56	GO:0008474: palmitoyl-(protein) hydrolase activity	3.24E-03
57	GO:0035252: UDP-xylosyltransferase activity	3.24E-03
58	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.33E-03
59	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.33E-03
60	GO:0003730: mRNA 3'-UTR binding	3.90E-03
61	GO:0004656: procollagen-proline 4-dioxygenase activity	3.90E-03
62	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.51E-03
63	GO:0009881: photoreceptor activity	4.60E-03
64	GO:0003872: 6-phosphofructokinase activity	4.60E-03
65	GO:0015140: malate transmembrane transporter activity	4.60E-03
66	GO:0004620: phospholipase activity	4.60E-03
67	GO:0016758: transferase activity, transferring hexosyl groups	4.80E-03
68	GO:0008312: 7S RNA binding	5.35E-03
69	GO:0004034: aldose 1-epimerase activity	5.35E-03
70	GO:0015491: cation:cation antiporter activity	5.35E-03
71	GO:0008142: oxysterol binding	6.13E-03
72	GO:0005267: potassium channel activity	6.13E-03
73	GO:0015297: antiporter activity	7.06E-03
74	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	8.39E-03
75	GO:0008194: UDP-glycosyltransferase activity	8.65E-03
76	GO:0004568: chitinase activity	8.70E-03
77	GO:0005545: 1-phosphatidylinositol binding	8.70E-03
78	GO:0047372: acylglycerol lipase activity	9.63E-03
79	GO:0008559: xenobiotic-transporting ATPase activity	9.63E-03
80	GO:0004364: glutathione transferase activity	1.04E-02
81	GO:0015116: sulfate transmembrane transporter activity	1.06E-02
82	GO:0000155: phosphorelay sensor kinase activity	1.16E-02
83	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.26E-02
84	GO:0003712: transcription cofactor activity	1.37E-02
85	GO:0005524: ATP binding	1.43E-02
86	GO:0043531: ADP binding	1.47E-02
87	GO:0031418: L-ascorbic acid binding	1.59E-02
88	GO:0045735: nutrient reservoir activity	1.73E-02
89	GO:0004707: MAP kinase activity	1.82E-02
90	GO:0061630: ubiquitin protein ligase activity	1.83E-02
91	GO:0016779: nucleotidyltransferase activity	1.95E-02
92	GO:0008810: cellulase activity	2.07E-02
93	GO:0003756: protein disulfide isomerase activity	2.20E-02
94	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.38E-02
95	GO:0030276: clathrin binding	2.59E-02
96	GO:0016853: isomerase activity	2.73E-02
97	GO:0010181: FMN binding	2.73E-02
98	GO:0030170: pyridoxal phosphate binding	2.90E-02
99	GO:0008483: transaminase activity	3.61E-02
100	GO:0051213: dioxygenase activity	3.92E-02
101	GO:0008375: acetylglucosaminyltransferase activity	4.24E-02
102	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.24E-02
103	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.40E-02
104	GO:0102483: scopolin beta-glucosidase activity	4.40E-02
105	GO:0030247: polysaccharide binding	4.40E-02
106	GO:0004683: calmodulin-dependent protein kinase activity	4.40E-02
107	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.57E-02
108	GO:0015238: drug transmembrane transporter activity	4.90E-02
109	GO:0005096: GTPase activator activity	4.90E-02