gene detail

Gene description

TAIR ID: AT4G01800

Short description: Albino or Glassy Yellow 1

Pathogen responsiveness: -0.39

General responsiveness: 1.07

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to absence of light, regulation of photosynthesis, intracellular protein transport, chloroplast organization, trichome morphogenesis, protein targeting, protein import

GO cellular component

chloroplast stroma, plasma membrane, chloroplast, chloroplast thylakoid membrane, chloroplast envelope, membrane

GO molecular function

ATPase-coupled protein transmembrane transporter activity, ATP binding

Protein domain

Pfam	PF07517, SecA DEAD-like domain
Pfam	PF07516, SecA Wing and Scaffold domain
Pfam	PF01043, SecA preprotein cross-linking domain
SMART	SM00957, SecA_DEAD
SMART	SM00958, SecA_PP_bind

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03060: Protein export

Transcriptional regulation

Regulator:
AT5G56110, AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.06	2.86E-11
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.52	2.05E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.63	8.61E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.99	5.87E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.19	1.86E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.76	3.55E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.24	1.25E-15
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.72	2.70E-02
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.01	2.20E-03
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.77	1.08E-11
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.70	1.05E-10
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.65	1.87E-10
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.80	3.06E-11
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	-1.66	3.62E-09
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.66	3.43E-03