GO Enrichment Analysis of Co-expressed Genes with
AT4G01800
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0034337: RNA folding | 8.86E-06 |
| 3 | GO:0010289: homogalacturonan biosynthetic process | 2.38E-05 |
| 4 | GO:0046168: glycerol-3-phosphate catabolic process | 4.33E-05 |
| 5 | GO:0015979: photosynthesis | 4.54E-05 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 5.62E-05 |
| 7 | GO:0009413: response to flooding | 6.64E-05 |
| 8 | GO:0006072: glycerol-3-phosphate metabolic process | 6.64E-05 |
| 9 | GO:2001141: regulation of RNA biosynthetic process | 6.64E-05 |
| 10 | GO:0009616: virus induced gene silencing | 1.21E-04 |
| 11 | GO:1901259: chloroplast rRNA processing | 1.85E-04 |
| 12 | GO:0016246: RNA interference | 1.85E-04 |
| 13 | GO:0048564: photosystem I assembly | 2.54E-04 |
| 14 | GO:0071482: cellular response to light stimulus | 2.91E-04 |
| 15 | GO:0000373: Group II intron splicing | 3.29E-04 |
| 16 | GO:0010267: production of ta-siRNAs involved in RNA interference | 3.67E-04 |
| 17 | GO:0016441: posttranscriptional gene silencing | 4.07E-04 |
| 18 | GO:0030422: production of siRNA involved in RNA interference | 4.07E-04 |
| 19 | GO:0006352: DNA-templated transcription, initiation | 4.48E-04 |
| 20 | GO:0048467: gynoecium development | 5.76E-04 |
| 21 | GO:0048440: carpel development | 5.76E-04 |
| 22 | GO:0016117: carotenoid biosynthetic process | 1.00E-03 |
| 23 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.00E-03 |
| 24 | GO:0048544: recognition of pollen | 1.16E-03 |
| 25 | GO:0031047: gene silencing by RNA | 1.32E-03 |
| 26 | GO:0051607: defense response to virus | 1.55E-03 |
| 27 | GO:0009637: response to blue light | 2.25E-03 |
| 28 | GO:0016051: carbohydrate biosynthetic process | 2.25E-03 |
| 29 | GO:0010114: response to red light | 2.67E-03 |
| 30 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.34E-03 |
| 31 | GO:0048316: seed development | 3.73E-03 |
| 32 | GO:0005975: carbohydrate metabolic process | 5.43E-03 |
| 33 | GO:0009451: RNA modification | 6.12E-03 |
| 34 | GO:0009658: chloroplast organization | 8.16E-03 |
| 35 | GO:0006970: response to osmotic stress | 8.59E-03 |
| 36 | GO:0048366: leaf development | 9.15E-03 |
| 37 | GO:0045454: cell redox homeostasis | 1.08E-02 |
| 38 | GO:0009873: ethylene-activated signaling pathway | 1.50E-02 |
| 39 | GO:0009735: response to cytokinin | 1.76E-02 |
| 40 | GO:0009738: abscisic acid-activated signaling pathway | 1.83E-02 |
| 41 | GO:0015031: protein transport | 3.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016851: magnesium chelatase activity | 7.77E-08 |
| 2 | GO:0004856: xylulokinase activity | 8.86E-06 |
| 3 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 4.33E-05 |
| 4 | GO:0001053: plastid sigma factor activity | 9.27E-05 |
| 5 | GO:0016987: sigma factor activity | 9.27E-05 |
| 6 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.21E-04 |
| 7 | GO:0003968: RNA-directed 5'-3' RNA polymerase activity | 1.52E-04 |
| 8 | GO:0009982: pseudouridine synthase activity | 5.33E-04 |
| 9 | GO:0003887: DNA-directed DNA polymerase activity | 6.66E-04 |
| 10 | GO:0005528: FK506 binding | 7.11E-04 |
| 11 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 8.54E-04 |
| 12 | GO:0004185: serine-type carboxypeptidase activity | 2.67E-03 |
| 13 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.96E-03 |
| 14 | GO:0051287: NAD binding | 3.03E-03 |
| 15 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.26E-03 |
| 16 | GO:0005509: calcium ion binding | 3.31E-03 |
| 17 | GO:0019843: rRNA binding | 4.83E-03 |
| 18 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.92E-03 |
| 19 | GO:0003723: RNA binding | 5.20E-03 |
| 20 | GO:0004497: monooxygenase activity | 9.48E-03 |
| 21 | GO:0016887: ATPase activity | 1.70E-02 |
| 22 | GO:0019825: oxygen binding | 2.41E-02 |
| 23 | GO:0005506: iron ion binding | 3.07E-02 |
| 24 | GO:0005215: transporter activity | 3.33E-02 |
| 25 | GO:0003729: mRNA binding | 4.12E-02 |
| 26 | GO:0020037: heme binding | 4.30E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010007: magnesium chelatase complex | 3.16E-08 |
| 2 | GO:0031977: thylakoid lumen | 1.41E-06 |
| 3 | GO:0009570: chloroplast stroma | 7.27E-06 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 7.52E-06 |
| 5 | GO:0009654: photosystem II oxygen evolving complex | 1.10E-05 |
| 6 | GO:0009507: chloroplast | 1.58E-05 |
| 7 | GO:0019898: extrinsic component of membrane | 2.75E-05 |
| 8 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 6.64E-05 |
| 9 | GO:0009579: thylakoid | 1.98E-04 |
| 10 | GO:0009534: chloroplast thylakoid | 2.01E-04 |
| 11 | GO:0032040: small-subunit processome | 4.90E-04 |
| 12 | GO:0030095: chloroplast photosystem II | 5.76E-04 |
| 13 | GO:0009535: chloroplast thylakoid membrane | 1.08E-03 |
| 14 | GO:0009706: chloroplast inner membrane | 4.15E-03 |
| 15 | GO:0005730: nucleolus | 6.05E-03 |
| 16 | GO:0031969: chloroplast membrane | 9.48E-03 |
| 17 | GO:0009941: chloroplast envelope | 1.69E-02 |
| 18 | GO:0005802: trans-Golgi network | 2.62E-02 |
| 19 | GO:0005768: endosome | 2.88E-02 |
| 20 | GO:0005840: ribosome | 3.21E-02 |
| 21 | GO:0009536: plastid | 3.59E-02 |
| 22 | GO:0000139: Golgi membrane | 3.85E-02 |