gene detail

Gene description

TAIR ID: AT3G62090

Short description: phytochrome interacting factor 3-like 2

Pathogen responsiveness: -1.62

General responsiveness: -0.29

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

red or far-red light signaling pathway, regulation of transcription, DNA-templated, transcription

GO cellular component

nucleus

GO molecular function

DNA binding, protein binding, transcription factor activity, sequence-specific DNA binding, protein dimerization activity

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 7

Coexpression network

GSE13739_WT_GO view
GSE13739_EDS16_GO view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.65	2.08E-03
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.68	7.09E-04
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	-3.41	2.05E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-4.24	6.48E-08