gene detail

Gene description

TAIR ID: AT3G58600

Short description: Adaptin ear-binding coat-associated protein 1 NECAP-1

Pathogen responsiveness: -0.39

General responsiveness: -1.64

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G040401

Wheat: No orthologous gene

GO biological process

endocytosis

GO cellular component

membrane, cytoplasm

GO molecular function

molecular_function

Protein domain

Pfam	PF07933, Protein of unknown function (DUF1681)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

18 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 2 h	1.65	3.13E-06
GSE17464	Penta, control	Penta, Flg22 2 h	1.71	1.59E-06
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.76	8.75E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.15	8.82E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.52	2.35E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.74	5.67E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.51	1.39E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.19	1.86E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.00	9.89E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.78	4.06E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.91	1.73E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.28	9.90E-14
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.50	8.38E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.05	3.23E-13
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.60	4.66E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.87	1.36E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	2.42	6.10E-06
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	2.05	2.41E-05