Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G58600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
2GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)0.00E+00
3GO:0072660: maintenance of protein location in plasma membrane0.00E+00
4GO:0061025: membrane fusion1.10E-06
5GO:0000911: cytokinesis by cell plate formation2.49E-06
6GO:0042539: hypotonic salinity response2.08E-05
7GO:0009968: negative regulation of signal transduction2.08E-05
8GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway2.08E-05
9GO:0043547: positive regulation of GTPase activity2.08E-05
10GO:0051245: negative regulation of cellular defense response2.08E-05
11GO:0048278: vesicle docking4.40E-05
12GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)5.37E-05
13GO:0031349: positive regulation of defense response5.37E-05
14GO:0002221: pattern recognition receptor signaling pathway5.37E-05
15GO:2000072: regulation of defense response to fungus, incompatible interaction5.37E-05
16GO:0009737: response to abscisic acid8.86E-05
17GO:0002230: positive regulation of defense response to virus by host9.50E-05
18GO:0072661: protein targeting to plasma membrane9.50E-05
19GO:0010148: transpiration1.42E-04
20GO:0006612: protein targeting to membrane1.42E-04
21GO:0015696: ammonium transport1.42E-04
22GO:1902290: positive regulation of defense response to oomycetes1.42E-04
23GO:0006882: cellular zinc ion homeostasis1.42E-04
24GO:0006906: vesicle fusion1.68E-04
25GO:0072488: ammonium transmembrane transport1.95E-04
26GO:0010363: regulation of plant-type hypersensitive response1.95E-04
27GO:0007112: male meiosis cytokinesis1.95E-04
28GO:0000460: maturation of 5.8S rRNA1.95E-04
29GO:0080142: regulation of salicylic acid biosynthetic process1.95E-04
30GO:0006886: intracellular protein transport2.36E-04
31GO:0009867: jasmonic acid mediated signaling pathway2.53E-04
32GO:0006887: exocytosis3.02E-04
33GO:0000470: maturation of LSU-rRNA3.11E-04
34GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.73E-04
35GO:0009612: response to mechanical stimulus3.73E-04
36GO:0006694: steroid biosynthetic process3.73E-04
37GO:0009861: jasmonic acid and ethylene-dependent systemic resistance3.73E-04
38GO:1900057: positive regulation of leaf senescence4.37E-04
39GO:0009787: regulation of abscisic acid-activated signaling pathway5.05E-04
40GO:1900150: regulation of defense response to fungus5.05E-04
41GO:0043068: positive regulation of programmed cell death5.05E-04
42GO:0006102: isocitrate metabolic process5.05E-04
43GO:0006952: defense response5.64E-04
44GO:0009620: response to fungus5.67E-04
45GO:0006972: hyperosmotic response5.74E-04
46GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.18E-04
47GO:0071577: zinc II ion transmembrane transport7.18E-04
48GO:1900426: positive regulation of defense response to bacterium7.18E-04
49GO:0043069: negative regulation of programmed cell death7.94E-04
50GO:0010105: negative regulation of ethylene-activated signaling pathway9.50E-04
51GO:0007034: vacuolar transport1.11E-03
52GO:0007030: Golgi organization1.20E-03
53GO:0070588: calcium ion transmembrane transport1.20E-03
54GO:0009863: salicylic acid mediated signaling pathway1.38E-03
55GO:0010187: negative regulation of seed germination1.38E-03
56GO:0043622: cortical microtubule organization1.47E-03
57GO:0016226: iron-sulfur cluster assembly1.66E-03
58GO:0031348: negative regulation of defense response1.66E-03
59GO:0042127: regulation of cell proliferation1.86E-03
60GO:0009306: protein secretion1.86E-03
61GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.96E-03
62GO:0016192: vesicle-mediated transport2.04E-03
63GO:0010182: sugar mediated signaling pathway2.17E-03
64GO:0009749: response to glucose2.39E-03
65GO:0030163: protein catabolic process2.73E-03
66GO:0006904: vesicle docking involved in exocytosis2.96E-03
67GO:0010119: regulation of stomatal movement4.24E-03
68GO:0007568: aging4.24E-03
69GO:0045087: innate immune response4.51E-03
70GO:0006468: protein phosphorylation4.57E-03
71GO:0006099: tricarboxylic acid cycle4.65E-03
72GO:0030001: metal ion transport4.93E-03
73GO:0006897: endocytosis5.07E-03
74GO:0051707: response to other organism5.37E-03
75GO:0050832: defense response to fungus5.87E-03
76GO:0009626: plant-type hypersensitive response7.73E-03
77GO:0009624: response to nematode8.42E-03
78GO:0018105: peptidyl-serine phosphorylation8.59E-03
79GO:0009414: response to water deprivation9.91E-03
80GO:0042742: defense response to bacterium1.01E-02
81GO:0007166: cell surface receptor signaling pathway1.36E-02
82GO:0009409: response to cold1.38E-02
83GO:0009617: response to bacterium1.40E-02
84GO:0010468: regulation of gene expression1.40E-02
85GO:0046777: protein autophosphorylation2.06E-02
86GO:0007165: signal transduction2.12E-02
87GO:0016042: lipid catabolic process2.54E-02
88GO:0006629: lipid metabolic process2.59E-02
89GO:0009408: response to heat2.59E-02
90GO:0009873: ethylene-activated signaling pathway3.11E-02
91GO:0006508: proteolysis3.13E-02
92GO:0009734: auxin-activated signaling pathway3.31E-02
93GO:0009651: response to salt stress3.42E-02
94GO:0009555: pollen development3.90E-02
95GO:0035556: intracellular signal transduction4.05E-02
96GO:0055085: transmembrane transport4.62E-02
97GO:0006511: ubiquitin-dependent protein catabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
2GO:0005515: protein binding6.37E-06
3GO:0005484: SNAP receptor activity1.02E-05
4GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.08E-05
5GO:0015085: calcium ion transmembrane transporter activity2.08E-05
6GO:0038199: ethylene receptor activity5.37E-05
7GO:0043021: ribonucleoprotein complex binding5.37E-05
8GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity9.50E-05
9GO:0008253: 5'-nucleotidase activity9.50E-05
10GO:0004449: isocitrate dehydrogenase (NAD+) activity1.42E-04
11GO:0051740: ethylene binding1.42E-04
12GO:0043495: protein anchor1.95E-04
13GO:0004930: G-protein coupled receptor activity1.95E-04
14GO:0000149: SNARE binding2.77E-04
15GO:0031593: polyubiquitin binding3.11E-04
16GO:0008519: ammonium transmembrane transporter activity3.11E-04
17GO:0004673: protein histidine kinase activity7.94E-04
18GO:0008559: xenobiotic-transporting ATPase activity8.71E-04
19GO:0005388: calcium-transporting ATPase activity1.03E-03
20GO:0000155: phosphorelay sensor kinase activity1.03E-03
21GO:0005516: calmodulin binding1.03E-03
22GO:0004190: aspartic-type endopeptidase activity1.20E-03
23GO:0005385: zinc ion transmembrane transporter activity1.38E-03
24GO:0043130: ubiquitin binding1.38E-03
25GO:0004707: MAP kinase activity1.56E-03
26GO:0046873: metal ion transmembrane transporter activity2.17E-03
27GO:0004872: receptor activity2.39E-03
28GO:0004672: protein kinase activity2.41E-03
29GO:0004197: cysteine-type endopeptidase activity2.61E-03
30GO:0005524: ATP binding2.62E-03
31GO:0009931: calcium-dependent protein serine/threonine kinase activity3.45E-03
32GO:0004806: triglyceride lipase activity3.58E-03
33GO:0004683: calmodulin-dependent protein kinase activity3.58E-03
34GO:0016301: kinase activity3.90E-03
35GO:0005096: GTPase activator activity3.97E-03
36GO:0051537: 2 iron, 2 sulfur cluster binding5.66E-03
37GO:0008565: protein transporter activity1.12E-02
38GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.18E-02
39GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.46E-02
40GO:0046872: metal ion binding1.51E-02
41GO:0043531: ADP binding1.80E-02
42GO:0052689: carboxylic ester hydrolase activity2.11E-02
43GO:0008289: lipid binding3.28E-02
44GO:0000166: nucleotide binding3.90E-02
45GO:0004674: protein serine/threonine kinase activity4.99E-02
RankGO TermAdjusted P value
1GO:0009504: cell plate1.25E-06
2GO:0070545: PeBoW complex5.37E-05
3GO:0005901: caveola5.37E-05
4GO:0070062: extracellular exosome1.42E-04
5GO:0031201: SNARE complex3.02E-04
6GO:0005886: plasma membrane3.59E-04
7GO:0030687: preribosome, large subunit precursor4.37E-04
8GO:0030131: clathrin adaptor complex5.05E-04
9GO:0005758: mitochondrial intermembrane space1.38E-03
10GO:0005905: clathrin-coated pit1.56E-03
11GO:0005789: endoplasmic reticulum membrane2.53E-03
12GO:0000145: exocyst2.61E-03
13GO:0019005: SCF ubiquitin ligase complex3.84E-03
14GO:0005783: endoplasmic reticulum3.91E-03
15GO:0000325: plant-type vacuole4.24E-03
16GO:0010008: endosome membrane7.57E-03
17GO:0005834: heterotrimeric G-protein complex7.73E-03
18GO:0005802: trans-Golgi network8.02E-03
19GO:0005654: nucleoplasm9.67E-03
20GO:0005829: cytosol1.15E-02
21GO:0016021: integral component of membrane1.40E-02
22GO:0005737: cytoplasm1.47E-02
23GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.80E-02
24GO:0005874: microtubule1.91E-02
25GO:0005887: integral component of plasma membrane3.22E-02
26GO:0005774: vacuolar membrane3.53E-02
27GO:0009506: plasmodesma3.86E-02
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Gene type



Gene DE type