co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G58600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
2	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
3	GO:0046865: terpenoid transport	0.00E+00
4	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
5	GO:0002237: response to molecule of bacterial origin	4.73E-05
6	GO:0031930: mitochondria-nucleus signaling pathway	1.45E-04
7	GO:0009306: protein secretion	1.56E-04
8	GO:0043547: positive regulation of GTPase activity	2.57E-04
9	GO:0015969: guanosine tetraphosphate metabolic process	2.57E-04
10	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.57E-04
11	GO:0050691: regulation of defense response to virus by host	2.57E-04
12	GO:1902065: response to L-glutamate	2.57E-04
13	GO:0032491: detection of molecule of fungal origin	2.57E-04
14	GO:0009968: negative regulation of signal transduction	2.57E-04
15	GO:0034975: protein folding in endoplasmic reticulum	2.57E-04
16	GO:0009812: flavonoid metabolic process	5.68E-04
17	GO:0002240: response to molecule of oomycetes origin	5.68E-04
18	GO:0019725: cellular homeostasis	5.68E-04
19	GO:0080183: response to photooxidative stress	5.68E-04
20	GO:0010155: regulation of proton transport	5.68E-04
21	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.68E-04
22	GO:0010200: response to chitin	6.32E-04
23	GO:0045087: innate immune response	8.93E-04
24	GO:0015692: lead ion transport	9.22E-04
25	GO:0052546: cell wall pectin metabolic process	9.22E-04
26	GO:0080168: abscisic acid transport	9.22E-04
27	GO:0061158: 3'-UTR-mediated mRNA destabilization	9.22E-04
28	GO:0045836: positive regulation of meiotic nuclear division	9.22E-04
29	GO:0006065: UDP-glucuronate biosynthetic process	9.22E-04
30	GO:0015783: GDP-fucose transport	9.22E-04
31	GO:0009901: anther dehiscence	9.38E-04
32	GO:0010731: protein glutathionylation	1.32E-03
33	GO:0071323: cellular response to chitin	1.32E-03
34	GO:0071456: cellular response to hypoxia	1.52E-03
35	GO:0045227: capsule polysaccharide biosynthetic process	1.76E-03
36	GO:0033358: UDP-L-arabinose biosynthetic process	1.76E-03
37	GO:0022622: root system development	1.76E-03
38	GO:0009247: glycolipid biosynthetic process	2.25E-03
39	GO:0045927: positive regulation of growth	2.25E-03
40	GO:0030041: actin filament polymerization	2.25E-03
41	GO:0009229: thiamine diphosphate biosynthetic process	2.25E-03
42	GO:0048317: seed morphogenesis	2.77E-03
43	GO:0009228: thiamine biosynthetic process	2.77E-03
44	GO:0033365: protein localization to organelle	2.77E-03
45	GO:0010337: regulation of salicylic acid metabolic process	2.77E-03
46	GO:0002238: response to molecule of fungal origin	2.77E-03
47	GO:0006354: DNA-templated transcription, elongation	2.77E-03
48	GO:0010193: response to ozone	2.79E-03
49	GO:0018105: peptidyl-serine phosphorylation	2.89E-03
50	GO:0009738: abscisic acid-activated signaling pathway	3.04E-03
51	GO:0071470: cellular response to osmotic stress	3.33E-03
52	GO:0045926: negative regulation of growth	3.33E-03
53	GO:0042742: defense response to bacterium	3.34E-03
54	GO:0006904: vesicle docking involved in exocytosis	3.59E-03
55	GO:0046470: phosphatidylcholine metabolic process	3.93E-03
56	GO:0051510: regulation of unidimensional cell growth	3.93E-03
57	GO:0006906: vesicle fusion	4.49E-03
58	GO:0010928: regulation of auxin mediated signaling pathway	4.56E-03
59	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.56E-03
60	GO:1900150: regulation of defense response to fungus	4.56E-03
61	GO:0019375: galactolipid biosynthetic process	4.56E-03
62	GO:0045010: actin nucleation	4.56E-03
63	GO:0031540: regulation of anthocyanin biosynthetic process	4.56E-03
64	GO:0009751: response to salicylic acid	4.96E-03
65	GO:0009737: response to abscisic acid	5.10E-03
66	GO:0010208: pollen wall assembly	5.22E-03
67	GO:0001558: regulation of cell growth	5.22E-03
68	GO:0010204: defense response signaling pathway, resistance gene-independent	5.22E-03
69	GO:0007338: single fertilization	5.92E-03
70	GO:0010112: regulation of systemic acquired resistance	5.92E-03
71	GO:0006379: mRNA cleavage	5.92E-03
72	GO:0015780: nucleotide-sugar transport	5.92E-03
73	GO:0048268: clathrin coat assembly	6.64E-03
74	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.64E-03
75	GO:0008202: steroid metabolic process	6.64E-03
76	GO:1900426: positive regulation of defense response to bacterium	6.64E-03
77	GO:0006032: chitin catabolic process	7.40E-03
78	GO:0006887: exocytosis	7.91E-03
79	GO:0006897: endocytosis	7.91E-03
80	GO:0006913: nucleocytoplasmic transport	8.19E-03
81	GO:0019684: photosynthesis, light reaction	8.19E-03
82	GO:0009089: lysine biosynthetic process via diaminopimelate	8.19E-03
83	GO:0045037: protein import into chloroplast stroma	9.00E-03
84	GO:0000266: mitochondrial fission	9.00E-03
85	GO:0006626: protein targeting to mitochondrion	9.85E-03
86	GO:2000028: regulation of photoperiodism, flowering	9.85E-03
87	GO:0018107: peptidyl-threonine phosphorylation	9.85E-03
88	GO:0031347: regulation of defense response	1.04E-02
89	GO:0007034: vacuolar transport	1.07E-02
90	GO:0009266: response to temperature stimulus	1.07E-02
91	GO:0009225: nucleotide-sugar metabolic process	1.16E-02
92	GO:0007030: Golgi organization	1.16E-02
93	GO:0046688: response to copper ion	1.16E-02
94	GO:0070588: calcium ion transmembrane transport	1.16E-02
95	GO:0034976: response to endoplasmic reticulum stress	1.25E-02
96	GO:0009863: salicylic acid mediated signaling pathway	1.35E-02
97	GO:0045333: cellular respiration	1.35E-02
98	GO:0080147: root hair cell development	1.35E-02
99	GO:0016192: vesicle-mediated transport	1.37E-02
100	GO:0046777: protein autophosphorylation	1.40E-02
101	GO:0043622: cortical microtubule organization	1.45E-02
102	GO:0006825: copper ion transport	1.45E-02
103	GO:0048278: vesicle docking	1.55E-02
104	GO:0051321: meiotic cell cycle	1.55E-02
105	GO:0016998: cell wall macromolecule catabolic process	1.55E-02
106	GO:0006952: defense response	1.62E-02
107	GO:0009814: defense response, incompatible interaction	1.65E-02
108	GO:0031348: negative regulation of defense response	1.65E-02
109	GO:0015031: protein transport	1.67E-02
110	GO:0006012: galactose metabolic process	1.76E-02
111	GO:0010584: pollen exine formation	1.86E-02
112	GO:0042127: regulation of cell proliferation	1.86E-02
113	GO:0009408: response to heat	2.10E-02
114	GO:0009960: endosperm development	2.20E-02
115	GO:0008360: regulation of cell shape	2.20E-02
116	GO:0006885: regulation of pH	2.20E-02
117	GO:0010197: polar nucleus fusion	2.20E-02
118	GO:0010182: sugar mediated signaling pathway	2.20E-02
119	GO:0009845: seed germination	2.25E-02
120	GO:0061025: membrane fusion	2.32E-02
121	GO:0006623: protein targeting to vacuole	2.43E-02
122	GO:0009749: response to glucose	2.43E-02
123	GO:0071554: cell wall organization or biogenesis	2.56E-02
124	GO:0002229: defense response to oomycetes	2.56E-02
125	GO:0007264: small GTPase mediated signal transduction	2.68E-02
126	GO:0010150: leaf senescence	2.87E-02
127	GO:0009567: double fertilization forming a zygote and endosperm	2.93E-02
128	GO:0006464: cellular protein modification process	2.93E-02
129	GO:0006470: protein dephosphorylation	3.27E-02
130	GO:0007166: cell surface receptor signaling pathway	3.27E-02
131	GO:0008380: RNA splicing	3.42E-02
132	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.46E-02
133	GO:0010029: regulation of seed germination	3.46E-02
134	GO:0006499: N-terminal protein myristoylation	4.30E-02
135	GO:0009611: response to wounding	4.39E-02
136	GO:0010043: response to zinc ion	4.45E-02
137	GO:0035556: intracellular signal transduction	4.57E-02
138	GO:0009867: jasmonic acid mediated signaling pathway	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
2	GO:0005212: structural constituent of eye lens	0.00E+00
3	GO:0050334: thiaminase activity	0.00E+00
4	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
5	GO:0046481: digalactosyldiacylglycerol synthase activity	2.57E-04
6	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.57E-04
7	GO:0032934: sterol binding	5.68E-04
8	GO:0048531: beta-1,3-galactosyltransferase activity	5.68E-04
9	GO:0015036: disulfide oxidoreductase activity	5.68E-04
10	GO:0008728: GTP diphosphokinase activity	5.68E-04
11	GO:0005509: calcium ion binding	8.23E-04
12	GO:0016531: copper chaperone activity	9.22E-04
13	GO:0005457: GDP-fucose transmembrane transporter activity	9.22E-04
14	GO:0003979: UDP-glucose 6-dehydrogenase activity	9.22E-04
15	GO:0035529: NADH pyrophosphatase activity	1.32E-03
16	GO:0035250: UDP-galactosyltransferase activity	1.32E-03
17	GO:0004930: G-protein coupled receptor activity	1.76E-03
18	GO:0009916: alternative oxidase activity	1.76E-03
19	GO:0050373: UDP-arabinose 4-epimerase activity	1.76E-03
20	GO:0008641: small protein activating enzyme activity	2.25E-03
21	GO:0004040: amidase activity	2.25E-03
22	GO:0047631: ADP-ribose diphosphatase activity	2.25E-03
23	GO:0016301: kinase activity	2.44E-03
24	GO:0000210: NAD+ diphosphatase activity	2.77E-03
25	GO:0015631: tubulin binding	3.33E-03
26	GO:0003978: UDP-glucose 4-epimerase activity	3.33E-03
27	GO:0003730: mRNA 3'-UTR binding	3.33E-03
28	GO:0004656: procollagen-proline 4-dioxygenase activity	3.33E-03
29	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.59E-03
30	GO:0008375: acetylglucosaminyltransferase activity	4.49E-03
31	GO:0004708: MAP kinase kinase activity	4.56E-03
32	GO:0005524: ATP binding	5.06E-03
33	GO:0008142: oxysterol binding	5.22E-03
34	GO:0004630: phospholipase D activity	5.22E-03
35	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.22E-03
36	GO:0000149: SNARE binding	7.27E-03
37	GO:0004712: protein serine/threonine/tyrosine kinase activity	7.27E-03
38	GO:0005545: 1-phosphatidylinositol binding	7.40E-03
39	GO:0004713: protein tyrosine kinase activity	7.40E-03
40	GO:0004568: chitinase activity	7.40E-03
41	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	7.58E-03
42	GO:0003676: nucleic acid binding	8.15E-03
43	GO:0005543: phospholipid binding	8.19E-03
44	GO:0046872: metal ion binding	8.47E-03
45	GO:0005484: SNAP receptor activity	8.59E-03
46	GO:0015198: oligopeptide transporter activity	9.00E-03
47	GO:0005388: calcium-transporting ATPase activity	9.85E-03
48	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.85E-03
49	GO:0051287: NAD binding	1.04E-02
50	GO:0008061: chitin binding	1.16E-02
51	GO:0031418: L-ascorbic acid binding	1.35E-02
52	GO:0004707: MAP kinase activity	1.55E-02
53	GO:0016874: ligase activity	1.56E-02
54	GO:0015035: protein disulfide oxidoreductase activity	1.70E-02
55	GO:0003756: protein disulfide isomerase activity	1.86E-02
56	GO:0005451: monovalent cation:proton antiporter activity	2.09E-02
57	GO:0030276: clathrin binding	2.20E-02
58	GO:0015299: solute:proton antiporter activity	2.32E-02
59	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.67E-02
60	GO:0015297: antiporter activity	2.74E-02
61	GO:0015385: sodium:proton antiporter activity	2.80E-02
62	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.80E-02
63	GO:0008483: transaminase activity	3.06E-02
64	GO:0016413: O-acetyltransferase activity	3.19E-02
65	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.59E-02
66	GO:0004683: calmodulin-dependent protein kinase activity	3.73E-02
67	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.01E-02
68	GO:0005096: GTPase activator activity	4.16E-02
69	GO:0005515: protein binding	4.72E-02
70	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.75E-02
71	GO:0043531: ADP binding	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0030054: cell junction	0.00E+00
2	GO:0016021: integral component of membrane	1.37E-04
3	GO:0031314: extrinsic component of mitochondrial inner membrane	5.68E-04
4	GO:0009898: cytoplasmic side of plasma membrane	1.76E-03
5	GO:0005783: endoplasmic reticulum	1.97E-03
6	GO:0000813: ESCRT I complex	2.25E-03
7	GO:0005789: endoplasmic reticulum membrane	2.48E-03
8	GO:0031463: Cul3-RING ubiquitin ligase complex	2.77E-03
9	GO:0005794: Golgi apparatus	3.04E-03
10	GO:0030665: clathrin-coated vesicle membrane	6.64E-03
11	GO:0055028: cortical microtubule	7.40E-03
12	GO:0017119: Golgi transport complex	7.40E-03
13	GO:0031201: SNARE complex	7.91E-03
14	GO:0031902: late endosome membrane	7.91E-03
15	GO:0005886: plasma membrane	8.72E-03
16	GO:0005795: Golgi stack	1.16E-02
17	GO:0005758: mitochondrial intermembrane space	1.35E-02
18	GO:0010008: endosome membrane	1.42E-02
19	GO:0070469: respiratory chain	1.45E-02
20	GO:0005741: mitochondrial outer membrane	1.55E-02
21	GO:0005905: clathrin-coated pit	1.55E-02
22	GO:0000139: Golgi membrane	1.86E-02
23	GO:0030136: clathrin-coated vesicle	1.97E-02
24	GO:0005770: late endosome	2.20E-02
25	GO:0005802: trans-Golgi network	2.45E-02
26	GO:0016592: mediator complex	2.68E-02
27	GO:0000145: exocyst	2.68E-02
28	GO:0071944: cell periphery	2.80E-02
29	GO:0032580: Golgi cisterna membrane	2.93E-02
30	GO:0005768: endosome	2.96E-02
31	GO:0005788: endoplasmic reticulum lumen	3.46E-02
32	GO:0009707: chloroplast outer membrane	4.01E-02