co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G58600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002764: immune response-regulating signaling pathway	0.00E+00
2	GO:0006983: ER overload response	0.00E+00
3	GO:1902001: fatty acid transmembrane transport	0.00E+00
4	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
5	GO:0006886: intracellular protein transport	5.24E-05
6	GO:1900057: positive regulation of leaf senescence	2.51E-04
7	GO:0015031: protein transport	2.88E-04
8	GO:0006643: membrane lipid metabolic process	3.09E-04
9	GO:0010045: response to nickel cation	3.09E-04
10	GO:1901430: positive regulation of syringal lignin biosynthetic process	3.09E-04
11	GO:1903648: positive regulation of chlorophyll catabolic process	3.09E-04
12	GO:0042350: GDP-L-fucose biosynthetic process	3.09E-04
13	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.09E-04
14	GO:0009609: response to symbiotic bacterium	3.09E-04
15	GO:0033306: phytol metabolic process	3.09E-04
16	GO:0006605: protein targeting	3.17E-04
17	GO:0009617: response to bacterium	4.07E-04
18	GO:0010112: regulation of systemic acquired resistance	4.68E-04
19	GO:0015908: fatty acid transport	6.76E-04
20	GO:0044419: interspecies interaction between organisms	6.76E-04
21	GO:0031349: positive regulation of defense response	6.76E-04
22	GO:0051258: protein polymerization	6.76E-04
23	GO:0060919: auxin influx	6.76E-04
24	GO:0010115: regulation of abscisic acid biosynthetic process	6.76E-04
25	GO:0000719: photoreactive repair	6.76E-04
26	GO:0043066: negative regulation of apoptotic process	6.76E-04
27	GO:0010042: response to manganese ion	6.76E-04
28	GO:0010271: regulation of chlorophyll catabolic process	6.76E-04
29	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	6.76E-04
30	GO:0015012: heparan sulfate proteoglycan biosynthetic process	6.76E-04
31	GO:0071668: plant-type cell wall assembly	6.76E-04
32	GO:0009838: abscission	6.76E-04
33	GO:0080181: lateral root branching	6.76E-04
34	GO:0006024: glycosaminoglycan biosynthetic process	6.76E-04
35	GO:0055088: lipid homeostasis	6.76E-04
36	GO:0016192: vesicle-mediated transport	1.04E-03
37	GO:0002230: positive regulation of defense response to virus by host	1.10E-03
38	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.10E-03
39	GO:0016045: detection of bacterium	1.10E-03
40	GO:0010359: regulation of anion channel activity	1.10E-03
41	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.10E-03
42	GO:0015695: organic cation transport	1.10E-03
43	GO:0009226: nucleotide-sugar biosynthetic process	1.57E-03
44	GO:0015696: ammonium transport	1.57E-03
45	GO:1902290: positive regulation of defense response to oomycetes	1.57E-03
46	GO:0043207: response to external biotic stimulus	1.57E-03
47	GO:0072334: UDP-galactose transmembrane transport	1.57E-03
48	GO:0006979: response to oxidative stress	1.79E-03
49	GO:0072488: ammonium transmembrane transport	2.11E-03
50	GO:0005513: detection of calcium ion	2.69E-03
51	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.69E-03
52	GO:0009229: thiamine diphosphate biosynthetic process	2.69E-03
53	GO:0034052: positive regulation of plant-type hypersensitive response	2.69E-03
54	GO:0006096: glycolytic process	3.09E-03
55	GO:0010315: auxin efflux	3.32E-03
56	GO:0009228: thiamine biosynthetic process	3.32E-03
57	GO:1900425: negative regulation of defense response to bacterium	3.32E-03
58	GO:0006014: D-ribose metabolic process	3.32E-03
59	GO:0009626: plant-type hypersensitive response	3.35E-03
60	GO:0071554: cell wall organization or biogenesis	3.63E-03
61	GO:0031930: mitochondria-nucleus signaling pathway	4.00E-03
62	GO:0009612: response to mechanical stimulus	4.00E-03
63	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	4.72E-03
64	GO:0010038: response to metal ion	4.72E-03
65	GO:0010044: response to aluminum ion	4.72E-03
66	GO:0009610: response to symbiotic fungus	4.72E-03
67	GO:0046470: phosphatidylcholine metabolic process	4.72E-03
68	GO:0043090: amino acid import	4.72E-03
69	GO:0001666: response to hypoxia	5.25E-03
70	GO:0006952: defense response	5.46E-03
71	GO:1900150: regulation of defense response to fungus	5.48E-03
72	GO:0016559: peroxisome fission	5.48E-03
73	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.48E-03
74	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.48E-03
75	GO:0009819: drought recovery	5.48E-03
76	GO:0009816: defense response to bacterium, incompatible interaction	5.55E-03
77	GO:0010204: defense response signaling pathway, resistance gene-independent	6.28E-03
78	GO:0010208: pollen wall assembly	6.28E-03
79	GO:0019432: triglyceride biosynthetic process	7.12E-03
80	GO:0080144: amino acid homeostasis	7.12E-03
81	GO:0009407: toxin catabolic process	7.56E-03
82	GO:0010150: leaf senescence	7.85E-03
83	GO:0007568: aging	7.93E-03
84	GO:0010380: regulation of chlorophyll biosynthetic process	8.01E-03
85	GO:1900426: positive regulation of defense response to bacterium	8.01E-03
86	GO:0030042: actin filament depolymerization	8.01E-03
87	GO:0006032: chitin catabolic process	8.92E-03
88	GO:0043069: negative regulation of programmed cell death	8.92E-03
89	GO:0006470: protein dephosphorylation	9.31E-03
90	GO:0019684: photosynthesis, light reaction	9.88E-03
91	GO:0030148: sphingolipid biosynthetic process	9.88E-03
92	GO:0000038: very long-chain fatty acid metabolic process	9.88E-03
93	GO:0045037: protein import into chloroplast stroma	1.09E-02
94	GO:0000266: mitochondrial fission	1.09E-02
95	GO:0006006: glucose metabolic process	1.19E-02
96	GO:0009636: response to toxic substance	1.26E-02
97	GO:0007034: vacuolar transport	1.30E-02
98	GO:0010540: basipetal auxin transport	1.30E-02
99	GO:0034605: cellular response to heat	1.30E-02
100	GO:0046688: response to copper ion	1.40E-02
101	GO:0070588: calcium ion transmembrane transport	1.40E-02
102	GO:0010053: root epidermal cell differentiation	1.40E-02
103	GO:0009809: lignin biosynthetic process	1.52E-02
104	GO:0080147: root hair cell development	1.63E-02
105	GO:2000377: regulation of reactive oxygen species metabolic process	1.63E-02
106	GO:0006825: copper ion transport	1.75E-02
107	GO:0051302: regulation of cell division	1.75E-02
108	GO:0016998: cell wall macromolecule catabolic process	1.87E-02
109	GO:0007005: mitochondrion organization	2.00E-02
110	GO:0071456: cellular response to hypoxia	2.00E-02
111	GO:0030245: cellulose catabolic process	2.00E-02
112	GO:0007275: multicellular organism development	2.09E-02
113	GO:0009411: response to UV	2.12E-02
114	GO:0006012: galactose metabolic process	2.12E-02
115	GO:0006284: base-excision repair	2.25E-02
116	GO:0009306: protein secretion	2.25E-02
117	GO:0010089: xylem development	2.25E-02
118	GO:0010584: pollen exine formation	2.25E-02
119	GO:0070417: cellular response to cold	2.39E-02
120	GO:0042391: regulation of membrane potential	2.52E-02
121	GO:0080022: primary root development	2.52E-02
122	GO:0000413: protein peptidyl-prolyl isomerization	2.52E-02
123	GO:0071472: cellular response to salt stress	2.66E-02
124	GO:0016042: lipid catabolic process	2.83E-02
125	GO:0019252: starch biosynthetic process	2.95E-02
126	GO:0042744: hydrogen peroxide catabolic process	3.09E-02
127	GO:0009630: gravitropism	3.24E-02
128	GO:0007264: small GTPase mediated signal transduction	3.24E-02
129	GO:0030163: protein catabolic process	3.39E-02
130	GO:0019760: glucosinolate metabolic process	3.55E-02
131	GO:0006904: vesicle docking involved in exocytosis	3.70E-02
132	GO:0051607: defense response to virus	3.86E-02
133	GO:0007166: cell surface receptor signaling pathway	4.27E-02
134	GO:0006950: response to stress	4.51E-02
135	GO:0016311: dephosphorylation	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
3	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
4	GO:0050334: thiaminase activity	0.00E+00
5	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
6	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
7	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
8	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
9	GO:0008320: protein transmembrane transporter activity	5.14E-08
10	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	3.09E-04
11	GO:0015245: fatty acid transporter activity	3.09E-04
12	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.09E-04
13	GO:0050577: GDP-L-fucose synthase activity	3.09E-04
14	GO:0030955: potassium ion binding	5.53E-04
15	GO:0004743: pyruvate kinase activity	5.53E-04
16	GO:0001671: ATPase activator activity	6.76E-04
17	GO:0045140: inositol phosphoceramide synthase activity	6.76E-04
18	GO:0015036: disulfide oxidoreductase activity	6.76E-04
19	GO:0052739: phosphatidylserine 1-acylhydrolase activity	6.76E-04
20	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	6.76E-04
21	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	6.76E-04
22	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	6.76E-04
23	GO:0008375: acetylglucosaminyltransferase activity	7.61E-04
24	GO:0016531: copper chaperone activity	1.10E-03
25	GO:0000975: regulatory region DNA binding	1.10E-03
26	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.57E-03
27	GO:0019199: transmembrane receptor protein kinase activity	2.11E-03
28	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	2.11E-03
29	GO:0010328: auxin influx transmembrane transporter activity	2.11E-03
30	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.69E-03
31	GO:0005496: steroid binding	2.69E-03
32	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.69E-03
33	GO:0008725: DNA-3-methyladenine glycosylase activity	2.69E-03
34	GO:0008374: O-acyltransferase activity	2.69E-03
35	GO:0005459: UDP-galactose transmembrane transporter activity	2.69E-03
36	GO:0008519: ammonium transmembrane transporter activity	3.32E-03
37	GO:0004747: ribokinase activity	4.00E-03
38	GO:0003978: UDP-glucose 4-epimerase activity	4.00E-03
39	GO:0004602: glutathione peroxidase activity	4.00E-03
40	GO:0004144: diacylglycerol O-acyltransferase activity	4.00E-03
41	GO:0004656: procollagen-proline 4-dioxygenase activity	4.00E-03
42	GO:0004143: diacylglycerol kinase activity	4.72E-03
43	GO:0005509: calcium ion binding	4.84E-03
44	GO:0016413: O-acetyltransferase activity	4.96E-03
45	GO:0008865: fructokinase activity	5.48E-03
46	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.48E-03
47	GO:0003951: NAD+ kinase activity	6.28E-03
48	GO:0004630: phospholipase D activity	6.28E-03
49	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	6.28E-03
50	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	6.28E-03
51	GO:0071949: FAD binding	7.12E-03
52	GO:0004713: protein tyrosine kinase activity	8.92E-03
53	GO:0004568: chitinase activity	8.92E-03
54	GO:0008171: O-methyltransferase activity	8.92E-03
55	GO:0015020: glucuronosyltransferase activity	8.92E-03
56	GO:0008794: arsenate reductase (glutaredoxin) activity	9.88E-03
57	GO:0008559: xenobiotic-transporting ATPase activity	9.88E-03
58	GO:0050661: NADP binding	9.92E-03
59	GO:0004842: ubiquitin-protein transferase activity	1.07E-02
60	GO:0004364: glutathione transferase activity	1.08E-02
61	GO:0010329: auxin efflux transmembrane transporter activity	1.19E-02
62	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.19E-02
63	GO:0005388: calcium-transporting ATPase activity	1.19E-02
64	GO:0005198: structural molecule activity	1.26E-02
65	GO:0000287: magnesium ion binding	1.34E-02
66	GO:0004190: aspartic-type endopeptidase activity	1.40E-02
67	GO:0030552: cAMP binding	1.40E-02
68	GO:0030553: cGMP binding	1.40E-02
69	GO:0004725: protein tyrosine phosphatase activity	1.52E-02
70	GO:0051536: iron-sulfur cluster binding	1.63E-02
71	GO:0031418: L-ascorbic acid binding	1.63E-02
72	GO:0003954: NADH dehydrogenase activity	1.63E-02
73	GO:0005216: ion channel activity	1.75E-02
74	GO:0051087: chaperone binding	1.75E-02
75	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.87E-02
76	GO:0016874: ligase activity	2.04E-02
77	GO:0008810: cellulase activity	2.12E-02
78	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.25E-02
79	GO:0008514: organic anion transmembrane transporter activity	2.25E-02
80	GO:0004871: signal transducer activity	2.39E-02
81	GO:0016757: transferase activity, transferring glycosyl groups	2.43E-02
82	GO:0005249: voltage-gated potassium channel activity	2.52E-02
83	GO:0030551: cyclic nucleotide binding	2.52E-02
84	GO:0004722: protein serine/threonine phosphatase activity	2.53E-02
85	GO:0050662: coenzyme binding	2.80E-02
86	GO:0016853: isomerase activity	2.80E-02
87	GO:0004518: nuclease activity	3.24E-02
88	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.49E-02
89	GO:0016791: phosphatase activity	3.55E-02
90	GO:0005525: GTP binding	3.77E-02
91	GO:0004721: phosphoprotein phosphatase activity	4.51E-02
92	GO:0004806: triglyceride lipase activity	4.51E-02
93	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.68E-02
94	GO:0016301: kinase activity	4.77E-02