Gene: AT3G57390
     


Gene description


TAIR ID: AT3G57390

Short description: AGAMOUS-like 18

Pathogen responsiveness: -1.36

General responsiveness: -1.54

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


positive regulation of transcription from RNA polymerase II promoter, transcription, DNA-templated, regulation of transcription, negative regulation of flower development, pollen development, negative regulation of short-day photoperiodism, flowering, flower development


GO cellular component


nucleus


GO molecular function


RNA polymerase II regulatory region sequence-specific DNA binding, transcription factor activity, sequence-specific DNA binding, protein dimerization activity, protein binding


Protein domain


PfamPF01486, K-box region
PfamPF00319, SRF-type transcription factor (DNA-binding and dimerisation domain)
SMARTSM00432, MADS

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G66600, AT5G07100, AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.543.72E-12
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.746.64E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.037.30E-25






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