Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G57390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071435: potassium ion export0.00E+00
2GO:0006489: dolichyl diphosphate biosynthetic process0.00E+00
3GO:0001881: receptor recycling0.00E+00
4GO:0006511: ubiquitin-dependent protein catabolic process1.45E-09
5GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.63E-05
6GO:0035266: meristem growth1.33E-04
7GO:0007292: female gamete generation1.33E-04
8GO:0097502: mannosylation1.33E-04
9GO:0019628: urate catabolic process1.33E-04
10GO:0006680: glucosylceramide catabolic process1.33E-04
11GO:0031338: regulation of vesicle fusion1.33E-04
12GO:0006474: N-terminal protein amino acid acetylation1.33E-04
13GO:0006144: purine nucleobase metabolic process1.33E-04
14GO:0071280: cellular response to copper ion1.33E-04
15GO:0051788: response to misfolded protein3.07E-04
16GO:0071457: cellular response to ozone3.07E-04
17GO:0018345: protein palmitoylation3.07E-04
18GO:0048209: regulation of vesicle targeting, to, from or within Golgi3.07E-04
19GO:0051252: regulation of RNA metabolic process3.07E-04
20GO:0043132: NAD transport3.07E-04
21GO:0010540: basipetal auxin transport3.42E-04
22GO:0007031: peroxisome organization3.84E-04
23GO:0010039: response to iron ion3.84E-04
24GO:0018342: protein prenylation5.06E-04
25GO:0060968: regulation of gene silencing5.06E-04
26GO:0008333: endosome to lysosome transport5.06E-04
27GO:0044375: regulation of peroxisome size5.06E-04
28GO:0090630: activation of GTPase activity5.06E-04
29GO:0051603: proteolysis involved in cellular protein catabolic process5.84E-04
30GO:0030433: ubiquitin-dependent ERAD pathway6.25E-04
31GO:0071484: cellular response to light intensity7.24E-04
32GO:0071329: cellular response to sucrose stimulus7.24E-04
33GO:0015858: nucleoside transport7.24E-04
34GO:0045454: cell redox homeostasis8.97E-04
35GO:1903830: magnesium ion transmembrane transport9.59E-04
36GO:0006661: phosphatidylinositol biosynthetic process9.59E-04
37GO:1990937: xylan acetylation9.59E-04
38GO:0032957: inositol trisphosphate metabolic process1.21E-03
39GO:0071493: cellular response to UV-B1.21E-03
40GO:0097428: protein maturation by iron-sulfur cluster transfer1.21E-03
41GO:0046686: response to cadmium ion1.25E-03
42GO:0030163: protein catabolic process1.28E-03
43GO:0010264: myo-inositol hexakisphosphate biosynthetic process1.49E-03
44GO:0048232: male gamete generation1.49E-03
45GO:0043248: proteasome assembly1.49E-03
46GO:0042176: regulation of protein catabolic process1.49E-03
47GO:0045040: protein import into mitochondrial outer membrane1.49E-03
48GO:0003006: developmental process involved in reproduction1.49E-03
49GO:0006121: mitochondrial electron transport, succinate to ubiquinone1.49E-03
50GO:0048827: phyllome development1.49E-03
51GO:0009554: megasporogenesis1.78E-03
52GO:0080027: response to herbivore2.09E-03
53GO:0015937: coenzyme A biosynthetic process2.09E-03
54GO:0015693: magnesium ion transport2.09E-03
55GO:0006499: N-terminal protein myristoylation2.30E-03
56GO:0010078: maintenance of root meristem identity2.42E-03
57GO:0034599: cellular response to oxidative stress2.76E-03
58GO:0007186: G-protein coupled receptor signaling pathway2.77E-03
59GO:0009657: plastid organization2.77E-03
60GO:0019430: removal of superoxide radicals2.77E-03
61GO:0046685: response to arsenic-containing substance3.13E-03
62GO:0048829: root cap development3.89E-03
63GO:0010015: root morphogenesis4.30E-03
64GO:0043085: positive regulation of catalytic activity4.30E-03
65GO:0010102: lateral root morphogenesis5.15E-03
66GO:0055046: microgametogenesis5.15E-03
67GO:0009266: response to temperature stimulus5.60E-03
68GO:0048768: root hair cell tip growth5.60E-03
69GO:0009933: meristem structural organization5.60E-03
70GO:0007034: vacuolar transport5.60E-03
71GO:0009651: response to salt stress5.65E-03
72GO:0046688: response to copper ion6.06E-03
73GO:0090351: seedling development6.06E-03
74GO:0070588: calcium ion transmembrane transport6.06E-03
75GO:0009624: response to nematode6.48E-03
76GO:0080147: root hair cell development7.01E-03
77GO:0006487: protein N-linked glycosylation7.01E-03
78GO:0006874: cellular calcium ion homeostasis7.51E-03
79GO:0016998: cell wall macromolecule catabolic process8.02E-03
80GO:0071456: cellular response to hypoxia8.55E-03
81GO:0006012: galactose metabolic process9.08E-03
82GO:0010227: floral organ abscission9.08E-03
83GO:0016117: carotenoid biosynthetic process1.02E-02
84GO:0042147: retrograde transport, endosome to Golgi1.02E-02
85GO:0010118: stomatal movement1.08E-02
86GO:0071472: cellular response to salt stress1.13E-02
87GO:0006662: glycerol ether metabolic process1.13E-02
88GO:0048544: recognition of pollen1.19E-02
89GO:0006623: protein targeting to vacuole1.25E-02
90GO:0008654: phospholipid biosynthetic process1.25E-02
91GO:0055072: iron ion homeostasis1.25E-02
92GO:0010193: response to ozone1.32E-02
93GO:0006891: intra-Golgi vesicle-mediated transport1.32E-02
94GO:0006914: autophagy1.51E-02
95GO:0071805: potassium ion transmembrane transport1.57E-02
96GO:0009615: response to virus1.71E-02
97GO:0009627: systemic acquired resistance1.85E-02
98GO:0006906: vesicle fusion1.85E-02
99GO:0006888: ER to Golgi vesicle-mediated transport1.92E-02
100GO:0055114: oxidation-reduction process1.94E-02
101GO:0009723: response to ethylene2.02E-02
102GO:0009817: defense response to fungus, incompatible interaction2.06E-02
103GO:0048767: root hair elongation2.14E-02
104GO:0010311: lateral root formation2.14E-02
105GO:0009834: plant-type secondary cell wall biogenesis2.21E-02
106GO:0006811: ion transport2.21E-02
107GO:0009407: toxin catabolic process2.21E-02
108GO:0048527: lateral root development2.29E-02
109GO:0010043: response to zinc ion2.29E-02
110GO:0035195: gene silencing by miRNA2.44E-02
111GO:0045087: innate immune response2.44E-02
112GO:0006099: tricarboxylic acid cycle2.52E-02
113GO:0006839: mitochondrial transport2.68E-02
114GO:0030001: metal ion transport2.68E-02
115GO:0006887: exocytosis2.76E-02
116GO:0009644: response to high light intensity3.09E-02
117GO:0009965: leaf morphogenesis3.18E-02
118GO:0009408: response to heat3.19E-02
119GO:0042742: defense response to bacterium3.23E-02
120GO:0006855: drug transmembrane transport3.26E-02
121GO:0042538: hyperosmotic salinity response3.44E-02
122GO:0009664: plant-type cell wall organization3.44E-02
123GO:0006486: protein glycosylation3.62E-02
124GO:0006813: potassium ion transport3.62E-02
125GO:0006857: oligopeptide transport3.80E-02
126GO:0006417: regulation of translation3.89E-02
127GO:0048316: seed development4.17E-02
128GO:0048367: shoot system development4.17E-02
129GO:0015031: protein transport4.33E-02
130GO:0009734: auxin-activated signaling pathway4.48E-02
131GO:0009742: brassinosteroid mediated signaling pathway4.84E-02
RankGO TermAdjusted P value
1GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity0.00E+00
2GO:0000033: alpha-1,3-mannosyltransferase activity0.00E+00
3GO:0004846: urate oxidase activity0.00E+00
4GO:0044610: FMN transmembrane transporter activity0.00E+00
5GO:0004298: threonine-type endopeptidase activity4.91E-07
6GO:0036402: proteasome-activating ATPase activity3.63E-05
7GO:2001227: quercitrin binding1.33E-04
8GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity1.33E-04
9GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity1.33E-04
10GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity1.33E-04
11GO:0048037: cofactor binding1.33E-04
12GO:0004348: glucosylceramidase activity1.33E-04
13GO:0004633: phosphopantothenoylcysteine decarboxylase activity1.33E-04
14GO:0015230: FAD transmembrane transporter activity1.33E-04
15GO:2001147: camalexin binding1.33E-04
16GO:0051724: NAD transporter activity3.07E-04
17GO:0004775: succinate-CoA ligase (ADP-forming) activity3.07E-04
18GO:0008428: ribonuclease inhibitor activity3.07E-04
19GO:1990585: hydroxyproline O-arabinosyltransferase activity3.07E-04
20GO:0051980: iron-nicotianamine transmembrane transporter activity3.07E-04
21GO:0008517: folic acid transporter activity3.07E-04
22GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity3.07E-04
23GO:0004776: succinate-CoA ligase (GDP-forming) activity3.07E-04
24GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity3.07E-04
25GO:0004596: peptide alpha-N-acetyltransferase activity3.07E-04
26GO:0015228: coenzyme A transmembrane transporter activity3.07E-04
27GO:0017025: TBP-class protein binding3.84E-04
28GO:0047325: inositol tetrakisphosphate 1-kinase activity5.06E-04
29GO:0004324: ferredoxin-NADP+ reductase activity5.06E-04
30GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity5.06E-04
31GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity7.24E-04
32GO:0016004: phospholipase activator activity9.59E-04
33GO:0009916: alternative oxidase activity9.59E-04
34GO:0004301: epoxide hydrolase activity9.59E-04
35GO:0008948: oxaloacetate decarboxylase activity1.21E-03
36GO:0080122: AMP transmembrane transporter activity1.21E-03
37GO:0017137: Rab GTPase binding1.21E-03
38GO:0000104: succinate dehydrogenase activity1.21E-03
39GO:1990538: xylan O-acetyltransferase activity1.49E-03
40GO:0004784: superoxide dismutase activity1.49E-03
41GO:0015217: ADP transmembrane transporter activity1.78E-03
42GO:0051920: peroxiredoxin activity1.78E-03
43GO:0005347: ATP transmembrane transporter activity1.78E-03
44GO:0043295: glutathione binding2.09E-03
45GO:0016209: antioxidant activity2.42E-03
46GO:0004034: aldose 1-epimerase activity2.42E-03
47GO:0005544: calcium-dependent phospholipid binding2.42E-03
48GO:0004714: transmembrane receptor protein tyrosine kinase activity2.42E-03
49GO:0004601: peroxidase activity2.98E-03
50GO:0045309: protein phosphorylated amino acid binding3.50E-03
51GO:0005198: structural molecule activity3.81E-03
52GO:0008233: peptidase activity3.82E-03
53GO:0030234: enzyme regulator activity3.89E-03
54GO:0008047: enzyme activator activity3.89E-03
55GO:0008794: arsenate reductase (glutaredoxin) activity4.30E-03
56GO:0019904: protein domain specific binding4.30E-03
57GO:0008327: methyl-CpG binding4.30E-03
58GO:0008559: xenobiotic-transporting ATPase activity4.30E-03
59GO:0015198: oligopeptide transporter activity4.72E-03
60GO:0005507: copper ion binding5.00E-03
61GO:0015095: magnesium ion transmembrane transporter activity5.15E-03
62GO:0004175: endopeptidase activity5.60E-03
63GO:0005217: intracellular ligand-gated ion channel activity6.06E-03
64GO:0008061: chitin binding6.06E-03
65GO:0004970: ionotropic glutamate receptor activity6.06E-03
66GO:0016874: ligase activity6.11E-03
67GO:0015035: protein disulfide oxidoreductase activity6.67E-03
68GO:0015079: potassium ion transmembrane transporter activity7.51E-03
69GO:0004540: ribonuclease activity8.02E-03
70GO:0047134: protein-disulfide reductase activity1.02E-02
71GO:0016887: ATPase activity1.12E-02
72GO:0008080: N-acetyltransferase activity1.13E-02
73GO:0001085: RNA polymerase II transcription factor binding1.13E-02
74GO:0003713: transcription coactivator activity1.13E-02
75GO:0005199: structural constituent of cell wall1.13E-02
76GO:0046873: metal ion transmembrane transporter activity1.13E-02
77GO:0004791: thioredoxin-disulfide reductase activity1.19E-02
78GO:0016853: isomerase activity1.19E-02
79GO:0010181: FMN binding1.19E-02
80GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.44E-02
81GO:0008237: metallopeptidase activity1.57E-02
82GO:0005524: ATP binding1.95E-02
83GO:0005096: GTPase activator activity2.14E-02
84GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.29E-02
85GO:0000149: SNARE binding2.60E-02
86GO:0004364: glutathione transferase activity2.84E-02
87GO:0005484: SNAP receptor activity2.92E-02
88GO:0009055: electron carrier activity3.42E-02
89GO:0003824: catalytic activity3.62E-02
90GO:0003779: actin binding4.55E-02
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Gene type



Gene DE type