GO Enrichment Analysis of Co-expressed Genes with
AT3G56860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 2 | GO:0090355: positive regulation of auxin metabolic process | 0.00E+00 |
| 3 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 4 | GO:0090358: positive regulation of tryptophan metabolic process | 0.00E+00 |
| 5 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 6 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 7 | GO:0043971: histone H3-K18 acetylation | 6.58E-05 |
| 8 | GO:0080175: phragmoplast microtubule organization | 1.59E-04 |
| 9 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.59E-04 |
| 10 | GO:0006013: mannose metabolic process | 2.69E-04 |
| 11 | GO:0071705: nitrogen compound transport | 2.69E-04 |
| 12 | GO:0009650: UV protection | 3.90E-04 |
| 13 | GO:1902290: positive regulation of defense response to oomycetes | 3.90E-04 |
| 14 | GO:1902476: chloride transmembrane transport | 3.90E-04 |
| 15 | GO:0071555: cell wall organization | 3.92E-04 |
| 16 | GO:0071249: cellular response to nitrate | 5.20E-04 |
| 17 | GO:0007623: circadian rhythm | 5.25E-04 |
| 18 | GO:0016558: protein import into peroxisome matrix | 6.60E-04 |
| 19 | GO:0051225: spindle assembly | 6.60E-04 |
| 20 | GO:0071493: cellular response to UV-B | 6.60E-04 |
| 21 | GO:0010315: auxin efflux | 8.06E-04 |
| 22 | GO:0030244: cellulose biosynthetic process | 8.40E-04 |
| 23 | GO:0009832: plant-type cell wall biogenesis | 8.81E-04 |
| 24 | GO:0034389: lipid particle organization | 9.59E-04 |
| 25 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 9.59E-04 |
| 26 | GO:0006821: chloride transport | 1.12E-03 |
| 27 | GO:0006401: RNA catabolic process | 1.12E-03 |
| 28 | GO:0006353: DNA-templated transcription, termination | 1.29E-03 |
| 29 | GO:0034968: histone lysine methylation | 1.29E-03 |
| 30 | GO:0044030: regulation of DNA methylation | 1.47E-03 |
| 31 | GO:0006002: fructose 6-phosphate metabolic process | 1.47E-03 |
| 32 | GO:0019432: triglyceride biosynthetic process | 1.65E-03 |
| 33 | GO:0016571: histone methylation | 1.85E-03 |
| 34 | GO:1900426: positive regulation of defense response to bacterium | 1.85E-03 |
| 35 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 1.85E-03 |
| 36 | GO:0010192: mucilage biosynthetic process | 2.05E-03 |
| 37 | GO:0015706: nitrate transport | 2.48E-03 |
| 38 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 2.48E-03 |
| 39 | GO:0080188: RNA-directed DNA methylation | 3.16E-03 |
| 40 | GO:0010167: response to nitrate | 3.16E-03 |
| 41 | GO:0009833: plant-type primary cell wall biogenesis | 3.40E-03 |
| 42 | GO:0006071: glycerol metabolic process | 3.40E-03 |
| 43 | GO:0000162: tryptophan biosynthetic process | 3.40E-03 |
| 44 | GO:0007010: cytoskeleton organization | 3.65E-03 |
| 45 | GO:0005975: carbohydrate metabolic process | 3.74E-03 |
| 46 | GO:0043622: cortical microtubule organization | 3.90E-03 |
| 47 | GO:0019748: secondary metabolic process | 4.43E-03 |
| 48 | GO:0010051: xylem and phloem pattern formation | 5.55E-03 |
| 49 | GO:0009851: auxin biosynthetic process | 6.45E-03 |
| 50 | GO:0009826: unidimensional cell growth | 6.45E-03 |
| 51 | GO:0009658: chloroplast organization | 6.69E-03 |
| 52 | GO:0006635: fatty acid beta-oxidation | 6.76E-03 |
| 53 | GO:0010583: response to cyclopentenone | 7.08E-03 |
| 54 | GO:0016049: cell growth | 1.02E-02 |
| 55 | GO:0006508: proteolysis | 1.09E-02 |
| 56 | GO:0009834: plant-type secondary cell wall biogenesis | 1.13E-02 |
| 57 | GO:0016042: lipid catabolic process | 1.19E-02 |
| 58 | GO:0009853: photorespiration | 1.24E-02 |
| 59 | GO:0008152: metabolic process | 1.35E-02 |
| 60 | GO:0051707: response to other organism | 1.49E-02 |
| 61 | GO:0031347: regulation of defense response | 1.70E-02 |
| 62 | GO:0009664: plant-type cell wall organization | 1.75E-02 |
| 63 | GO:0006364: rRNA processing | 1.84E-02 |
| 64 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.88E-02 |
| 65 | GO:0006096: glycolytic process | 2.07E-02 |
| 66 | GO:0009416: response to light stimulus | 2.18E-02 |
| 67 | GO:0051301: cell division | 2.38E-02 |
| 68 | GO:0051726: regulation of cell cycle | 2.46E-02 |
| 69 | GO:0006457: protein folding | 2.83E-02 |
| 70 | GO:0009451: RNA modification | 3.54E-02 |
| 71 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.60E-02 |
| 72 | GO:0006470: protein dephosphorylation | 3.83E-02 |
| 73 | GO:0007166: cell surface receptor signaling pathway | 3.83E-02 |
| 74 | GO:0009617: response to bacterium | 3.95E-02 |
| 75 | GO:0006468: protein phosphorylation | 4.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033947: mannosylglycoprotein endo-beta-mannosidase activity | 0.00E+00 |
| 2 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 3 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 6.58E-05 |
| 4 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 6.58E-05 |
| 5 | GO:0010429: methyl-CpNpN binding | 2.69E-04 |
| 6 | GO:0010428: methyl-CpNpG binding | 2.69E-04 |
| 7 | GO:0005253: anion channel activity | 5.20E-04 |
| 8 | GO:0080032: methyl jasmonate esterase activity | 5.20E-04 |
| 9 | GO:0010385: double-stranded methylated DNA binding | 5.20E-04 |
| 10 | GO:0004721: phosphoprotein phosphatase activity | 7.62E-04 |
| 11 | GO:0005247: voltage-gated chloride channel activity | 8.06E-04 |
| 12 | GO:0004144: diacylglycerol O-acyltransferase activity | 9.59E-04 |
| 13 | GO:0004559: alpha-mannosidase activity | 9.59E-04 |
| 14 | GO:0003872: 6-phosphofructokinase activity | 1.12E-03 |
| 15 | GO:0042393: histone binding | 1.19E-03 |
| 16 | GO:0004185: serine-type carboxypeptidase activity | 1.34E-03 |
| 17 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 1.47E-03 |
| 18 | GO:0004713: protein tyrosine kinase activity | 2.05E-03 |
| 19 | GO:0015020: glucuronosyltransferase activity | 2.05E-03 |
| 20 | GO:0008327: methyl-CpG binding | 2.26E-03 |
| 21 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.31E-03 |
| 22 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.31E-03 |
| 23 | GO:0000175: 3'-5'-exoribonuclease activity | 2.70E-03 |
| 24 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.93E-03 |
| 25 | GO:0016757: transferase activity, transferring glycosyl groups | 3.36E-03 |
| 26 | GO:0004176: ATP-dependent peptidase activity | 4.17E-03 |
| 27 | GO:0004540: ribonuclease activity | 4.17E-03 |
| 28 | GO:0016760: cellulose synthase (UDP-forming) activity | 4.70E-03 |
| 29 | GO:0008194: UDP-glycosyltransferase activity | 4.85E-03 |
| 30 | GO:0018024: histone-lysine N-methyltransferase activity | 5.26E-03 |
| 31 | GO:0004402: histone acetyltransferase activity | 5.55E-03 |
| 32 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 5.61E-03 |
| 33 | GO:0004674: protein serine/threonine kinase activity | 6.42E-03 |
| 34 | GO:0019901: protein kinase binding | 6.45E-03 |
| 35 | GO:0016788: hydrolase activity, acting on ester bonds | 6.82E-03 |
| 36 | GO:0016759: cellulose synthase activity | 7.73E-03 |
| 37 | GO:0004806: triglyceride lipase activity | 9.79E-03 |
| 38 | GO:0004871: signal transducer activity | 1.04E-02 |
| 39 | GO:0004722: protein serine/threonine phosphatase activity | 1.09E-02 |
| 40 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.13E-02 |
| 41 | GO:0004222: metalloendopeptidase activity | 1.13E-02 |
| 42 | GO:0016301: kinase activity | 1.94E-02 |
| 43 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.12E-02 |
| 44 | GO:0004650: polygalacturonase activity | 2.21E-02 |
| 45 | GO:0022857: transmembrane transporter activity | 2.26E-02 |
| 46 | GO:0051082: unfolded protein binding | 2.36E-02 |
| 47 | GO:0016758: transferase activity, transferring hexosyl groups | 2.72E-02 |
| 48 | GO:0016829: lyase activity | 2.93E-02 |
| 49 | GO:0030246: carbohydrate binding | 2.94E-02 |
| 50 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.32E-02 |
| 51 | GO:0008017: microtubule binding | 3.60E-02 |
| 52 | GO:0005524: ATP binding | 4.26E-02 |
| 53 | GO:0008168: methyltransferase activity | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010005: cortical microtubule, transverse to long axis | 1.63E-05 |
| 2 | GO:0010330: cellulose synthase complex | 2.69E-04 |
| 3 | GO:0070652: HAUS complex | 2.69E-04 |
| 4 | GO:0009505: plant-type cell wall | 5.89E-04 |
| 5 | GO:0000178: exosome (RNase complex) | 6.60E-04 |
| 6 | GO:0005945: 6-phosphofructokinase complex | 6.60E-04 |
| 7 | GO:0034707: chloride channel complex | 8.06E-04 |
| 8 | GO:0005819: spindle | 1.14E-03 |
| 9 | GO:0005811: lipid particle | 1.47E-03 |
| 10 | GO:0009524: phragmoplast | 3.32E-03 |
| 11 | GO:0045271: respiratory chain complex I | 3.90E-03 |
| 12 | GO:0000775: chromosome, centromeric region | 4.43E-03 |
| 13 | GO:0005802: trans-Golgi network | 7.18E-03 |
| 14 | GO:0005773: vacuole | 7.32E-03 |
| 15 | GO:0005768: endosome | 8.45E-03 |
| 16 | GO:0000932: P-body | 8.74E-03 |
| 17 | GO:0043231: intracellular membrane-bounded organelle | 1.35E-02 |
| 18 | GO:0031966: mitochondrial membrane | 1.75E-02 |
| 19 | GO:0005747: mitochondrial respiratory chain complex I | 2.12E-02 |
| 20 | GO:0009705: plant-type vacuole membrane | 3.49E-02 |
| 21 | GO:0005622: intracellular | 3.87E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 4.26E-02 |
| 23 | GO:0005774: vacuolar membrane | 4.58E-02 |