gene detail

Gene description

TAIR ID: AT3G54850

Short description: plant U-box 14

Pathogen responsiveness: -0.68

General responsiveness: -1.49

Orthologous

Rice: No orthologous gene

Maize:

Wheat:

GO biological process

protein ubiquitination

GO cellular component

nucleus, cytoplasm

GO molecular function

transmembrane receptor protein serine/threonine kinase binding, ubiquitin-protein transferase activity, protein binding

Protein domain

Pfam	PF00514, Armadillo/beta-catenin-like repeat
Pfam	PF04564, U-box domain
SMART	SM00185, ARM
SMART	SM00504, Ubox

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 19 (Top10%)

Coexpression network

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 1 h	1.71	8.82E-07
GSE17464	Penta, control	Penta, Flg22 2 h	1.86	1.69E-07
GSE17464	Penta, control	Penta, Flg22 2 h	1.69	2.53E-06
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.64	1.19E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.54	6.74E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.75	7.66E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.64	2.74E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.66	2.16E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.62	2.00E-13
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.95	1.36E-07