GO Enrichment Analysis of Co-expressed Genes with
AT3G54850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901017: negative regulation of potassium ion transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0007141: male meiosis I | 0.00E+00 |
| 3 | GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response | 0.00E+00 |
| 4 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 5 | GO:0010360: negative regulation of anion channel activity | 0.00E+00 |
| 6 | GO:1900425: negative regulation of defense response to bacterium | 1.59E-05 |
| 7 | GO:0009968: negative regulation of signal transduction | 8.09E-05 |
| 8 | GO:0080120: CAAX-box protein maturation | 8.09E-05 |
| 9 | GO:0071586: CAAX-box protein processing | 8.09E-05 |
| 10 | GO:0043547: positive regulation of GTPase activity | 8.09E-05 |
| 11 | GO:1902361: mitochondrial pyruvate transmembrane transport | 8.09E-05 |
| 12 | GO:0042742: defense response to bacterium | 1.15E-04 |
| 13 | GO:0015914: phospholipid transport | 1.93E-04 |
| 14 | GO:0030010: establishment of cell polarity | 1.93E-04 |
| 15 | GO:0051258: protein polymerization | 1.93E-04 |
| 16 | GO:0060919: auxin influx | 1.93E-04 |
| 17 | GO:0006850: mitochondrial pyruvate transport | 1.93E-04 |
| 18 | GO:0019441: tryptophan catabolic process to kynurenine | 1.93E-04 |
| 19 | GO:0034976: response to endoplasmic reticulum stress | 2.16E-04 |
| 20 | GO:0009410: response to xenobiotic stimulus | 3.24E-04 |
| 21 | GO:2000034: regulation of seed maturation | 3.24E-04 |
| 22 | GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening | 3.24E-04 |
| 23 | GO:0010359: regulation of anion channel activity | 3.24E-04 |
| 24 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 3.24E-04 |
| 25 | GO:0080055: low-affinity nitrate transport | 3.24E-04 |
| 26 | GO:0001676: long-chain fatty acid metabolic process | 4.66E-04 |
| 27 | GO:0006986: response to unfolded protein | 4.66E-04 |
| 28 | GO:0033320: UDP-D-xylose biosynthetic process | 6.21E-04 |
| 29 | GO:0010188: response to microbial phytotoxin | 6.21E-04 |
| 30 | GO:0009697: salicylic acid biosynthetic process | 7.86E-04 |
| 31 | GO:0001731: formation of translation preinitiation complex | 9.59E-04 |
| 32 | GO:0048232: male gamete generation | 9.59E-04 |
| 33 | GO:0070814: hydrogen sulfide biosynthetic process | 9.59E-04 |
| 34 | GO:0042732: D-xylose metabolic process | 9.59E-04 |
| 35 | GO:0010315: auxin efflux | 9.59E-04 |
| 36 | GO:1902456: regulation of stomatal opening | 9.59E-04 |
| 37 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.14E-03 |
| 38 | GO:0050790: regulation of catalytic activity | 1.34E-03 |
| 39 | GO:0043090: amino acid import | 1.34E-03 |
| 40 | GO:0006744: ubiquinone biosynthetic process | 1.34E-03 |
| 41 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 1.34E-03 |
| 42 | GO:0016559: peroxisome fission | 1.54E-03 |
| 43 | GO:0009819: drought recovery | 1.54E-03 |
| 44 | GO:0009642: response to light intensity | 1.54E-03 |
| 45 | GO:1900150: regulation of defense response to fungus | 1.54E-03 |
| 46 | GO:2000070: regulation of response to water deprivation | 1.54E-03 |
| 47 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.76E-03 |
| 48 | GO:0017004: cytochrome complex assembly | 1.76E-03 |
| 49 | GO:0015996: chlorophyll catabolic process | 1.76E-03 |
| 50 | GO:0009880: embryonic pattern specification | 1.76E-03 |
| 51 | GO:0009821: alkaloid biosynthetic process | 1.98E-03 |
| 52 | GO:0090333: regulation of stomatal closure | 1.98E-03 |
| 53 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.22E-03 |
| 54 | GO:0043069: negative regulation of programmed cell death | 2.46E-03 |
| 55 | GO:0051026: chiasma assembly | 2.46E-03 |
| 56 | GO:0000103: sulfate assimilation | 2.46E-03 |
| 57 | GO:0030148: sphingolipid biosynthetic process | 2.71E-03 |
| 58 | GO:0000266: mitochondrial fission | 2.97E-03 |
| 59 | GO:0045037: protein import into chloroplast stroma | 2.97E-03 |
| 60 | GO:0015706: nitrate transport | 2.97E-03 |
| 61 | GO:0009553: embryo sac development | 3.21E-03 |
| 62 | GO:0010540: basipetal auxin transport | 3.52E-03 |
| 63 | GO:0006446: regulation of translational initiation | 3.52E-03 |
| 64 | GO:0009225: nucleotide-sugar metabolic process | 3.81E-03 |
| 65 | GO:0010030: positive regulation of seed germination | 3.81E-03 |
| 66 | GO:0000027: ribosomal large subunit assembly | 4.40E-03 |
| 67 | GO:0009863: salicylic acid mediated signaling pathway | 4.40E-03 |
| 68 | GO:0061077: chaperone-mediated protein folding | 5.02E-03 |
| 69 | GO:0006366: transcription from RNA polymerase II promoter | 5.02E-03 |
| 70 | GO:0080092: regulation of pollen tube growth | 5.34E-03 |
| 71 | GO:0009814: defense response, incompatible interaction | 5.34E-03 |
| 72 | GO:0007131: reciprocal meiotic recombination | 5.34E-03 |
| 73 | GO:0006012: galactose metabolic process | 5.67E-03 |
| 74 | GO:0042127: regulation of cell proliferation | 6.01E-03 |
| 75 | GO:0010182: sugar mediated signaling pathway | 7.06E-03 |
| 76 | GO:0006468: protein phosphorylation | 7.48E-03 |
| 77 | GO:0006623: protein targeting to vacuole | 7.79E-03 |
| 78 | GO:0010183: pollen tube guidance | 7.79E-03 |
| 79 | GO:0009749: response to glucose | 7.79E-03 |
| 80 | GO:0002229: defense response to oomycetes | 8.17E-03 |
| 81 | GO:0010193: response to ozone | 8.17E-03 |
| 82 | GO:0000302: response to reactive oxygen species | 8.17E-03 |
| 83 | GO:0009630: gravitropism | 8.56E-03 |
| 84 | GO:0007264: small GTPase mediated signal transduction | 8.56E-03 |
| 85 | GO:0006310: DNA recombination | 9.34E-03 |
| 86 | GO:0006914: autophagy | 9.34E-03 |
| 87 | GO:0006904: vesicle docking involved in exocytosis | 9.75E-03 |
| 88 | GO:0051607: defense response to virus | 1.02E-02 |
| 89 | GO:0009615: response to virus | 1.06E-02 |
| 90 | GO:0010200: response to chitin | 1.13E-02 |
| 91 | GO:0042128: nitrate assimilation | 1.14E-02 |
| 92 | GO:0046777: protein autophosphorylation | 1.17E-02 |
| 93 | GO:0045454: cell redox homeostasis | 1.31E-02 |
| 94 | GO:0048767: root hair elongation | 1.32E-02 |
| 95 | GO:0006499: N-terminal protein myristoylation | 1.37E-02 |
| 96 | GO:0048527: lateral root development | 1.41E-02 |
| 97 | GO:0010119: regulation of stomatal movement | 1.41E-02 |
| 98 | GO:0006865: amino acid transport | 1.46E-02 |
| 99 | GO:0006887: exocytosis | 1.70E-02 |
| 100 | GO:0006631: fatty acid metabolic process | 1.70E-02 |
| 101 | GO:0009926: auxin polar transport | 1.80E-02 |
| 102 | GO:0009651: response to salt stress | 1.88E-02 |
| 103 | GO:0006260: DNA replication | 2.07E-02 |
| 104 | GO:0009736: cytokinin-activated signaling pathway | 2.23E-02 |
| 105 | GO:0009734: auxin-activated signaling pathway | 2.28E-02 |
| 106 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.29E-02 |
| 107 | GO:0010224: response to UV-B | 2.29E-02 |
| 108 | GO:0006857: oligopeptide transport | 2.34E-02 |
| 109 | GO:0006417: regulation of translation | 2.40E-02 |
| 110 | GO:0046686: response to cadmium ion | 2.40E-02 |
| 111 | GO:0006096: glycolytic process | 2.51E-02 |
| 112 | GO:0009735: response to cytokinin | 2.63E-02 |
| 113 | GO:0009620: response to fungus | 2.69E-02 |
| 114 | GO:0018105: peptidyl-serine phosphorylation | 2.93E-02 |
| 115 | GO:0009058: biosynthetic process | 3.49E-02 |
| 116 | GO:0006457: protein folding | 3.71E-02 |
| 117 | GO:0009790: embryo development | 3.76E-02 |
| 118 | GO:0006413: translational initiation | 4.02E-02 |
| 119 | GO:0010150: leaf senescence | 4.23E-02 |
| 120 | GO:0009451: RNA modification | 4.30E-02 |
| 121 | GO:0006470: protein dephosphorylation | 4.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 2 | GO:0005524: ATP binding | 1.11E-04 |
| 3 | GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.93E-04 |
| 4 | GO:0045140: inositol phosphoceramide synthase activity | 1.93E-04 |
| 5 | GO:0004061: arylformamidase activity | 1.93E-04 |
| 6 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 1.93E-04 |
| 7 | GO:0052692: raffinose alpha-galactosidase activity | 3.24E-04 |
| 8 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 3.24E-04 |
| 9 | GO:0004557: alpha-galactosidase activity | 3.24E-04 |
| 10 | GO:0050833: pyruvate transmembrane transporter activity | 3.24E-04 |
| 11 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 3.24E-04 |
| 12 | GO:0010328: auxin influx transmembrane transporter activity | 6.21E-04 |
| 13 | GO:0004930: G-protein coupled receptor activity | 6.21E-04 |
| 14 | GO:0048040: UDP-glucuronate decarboxylase activity | 9.59E-04 |
| 15 | GO:0031593: polyubiquitin binding | 9.59E-04 |
| 16 | GO:0070403: NAD+ binding | 1.14E-03 |
| 17 | GO:0102391: decanoate--CoA ligase activity | 1.14E-03 |
| 18 | GO:0003978: UDP-glucose 4-epimerase activity | 1.14E-03 |
| 19 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.34E-03 |
| 20 | GO:0016301: kinase activity | 1.63E-03 |
| 21 | GO:0015293: symporter activity | 1.96E-03 |
| 22 | GO:0071949: FAD binding | 1.98E-03 |
| 23 | GO:0003678: DNA helicase activity | 1.98E-03 |
| 24 | GO:0030955: potassium ion binding | 2.22E-03 |
| 25 | GO:0016844: strictosidine synthase activity | 2.22E-03 |
| 26 | GO:0004743: pyruvate kinase activity | 2.22E-03 |
| 27 | GO:0004713: protein tyrosine kinase activity | 2.46E-03 |
| 28 | GO:0008559: xenobiotic-transporting ATPase activity | 2.71E-03 |
| 29 | GO:0004674: protein serine/threonine kinase activity | 3.09E-03 |
| 30 | GO:0000175: 3'-5'-exoribonuclease activity | 3.24E-03 |
| 31 | GO:0010329: auxin efflux transmembrane transporter activity | 3.24E-03 |
| 32 | GO:0004175: endopeptidase activity | 3.52E-03 |
| 33 | GO:0004535: poly(A)-specific ribonuclease activity | 3.52E-03 |
| 34 | GO:0043130: ubiquitin binding | 4.40E-03 |
| 35 | GO:0005528: FK506 binding | 4.40E-03 |
| 36 | GO:0005515: protein binding | 4.81E-03 |
| 37 | GO:0008408: 3'-5' exonuclease activity | 5.02E-03 |
| 38 | GO:0004540: ribonuclease activity | 5.02E-03 |
| 39 | GO:0003729: mRNA binding | 5.52E-03 |
| 40 | GO:0003727: single-stranded RNA binding | 6.01E-03 |
| 41 | GO:0003756: protein disulfide isomerase activity | 6.01E-03 |
| 42 | GO:0047134: protein-disulfide reductase activity | 6.35E-03 |
| 43 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 7.22E-03 |
| 44 | GO:0004791: thioredoxin-disulfide reductase activity | 7.42E-03 |
| 45 | GO:0016853: isomerase activity | 7.42E-03 |
| 46 | GO:0004197: cysteine-type endopeptidase activity | 8.56E-03 |
| 47 | GO:0016791: phosphatase activity | 9.34E-03 |
| 48 | GO:0016597: amino acid binding | 1.02E-02 |
| 49 | GO:0051213: dioxygenase activity | 1.06E-02 |
| 50 | GO:0004497: monooxygenase activity | 1.09E-02 |
| 51 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.14E-02 |
| 52 | GO:0004683: calmodulin-dependent protein kinase activity | 1.19E-02 |
| 53 | GO:0004721: phosphoprotein phosphatase activity | 1.19E-02 |
| 54 | GO:0005096: GTPase activator activity | 1.32E-02 |
| 55 | GO:0004222: metalloendopeptidase activity | 1.37E-02 |
| 56 | GO:0030145: manganese ion binding | 1.41E-02 |
| 57 | GO:0004722: protein serine/threonine phosphatase activity | 1.44E-02 |
| 58 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.51E-02 |
| 59 | GO:0003697: single-stranded DNA binding | 1.51E-02 |
| 60 | GO:0003824: catalytic activity | 1.54E-02 |
| 61 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.60E-02 |
| 62 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.01E-02 |
| 63 | GO:0015171: amino acid transmembrane transporter activity | 2.40E-02 |
| 64 | GO:0008234: cysteine-type peptidase activity | 2.40E-02 |
| 65 | GO:0016874: ligase activity | 2.75E-02 |
| 66 | GO:0000166: nucleotide binding | 2.87E-02 |
| 67 | GO:0008026: ATP-dependent helicase activity | 2.99E-02 |
| 68 | GO:0004386: helicase activity | 3.05E-02 |
| 69 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.43E-02 |
| 70 | GO:0043565: sequence-specific DNA binding | 3.50E-02 |
| 71 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.69E-02 |
| 72 | GO:0008565: protein transporter activity | 3.82E-02 |
| 73 | GO:0030246: carbohydrate binding | 3.85E-02 |
| 74 | GO:0003743: translation initiation factor activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045335: phagocytic vesicle | 0.00E+00 |
| 2 | GO:0030014: CCR4-NOT complex | 8.09E-05 |
| 3 | GO:0070062: extracellular exosome | 4.66E-04 |
| 4 | GO:0005829: cytosol | 5.36E-04 |
| 5 | GO:0005783: endoplasmic reticulum | 5.71E-04 |
| 6 | GO:0005746: mitochondrial respiratory chain | 7.86E-04 |
| 7 | GO:0016282: eukaryotic 43S preinitiation complex | 9.59E-04 |
| 8 | GO:0033290: eukaryotic 48S preinitiation complex | 1.14E-03 |
| 9 | GO:0016272: prefoldin complex | 1.14E-03 |
| 10 | GO:0031305: integral component of mitochondrial inner membrane | 1.54E-03 |
| 11 | GO:0017119: Golgi transport complex | 2.46E-03 |
| 12 | GO:0048471: perinuclear region of cytoplasm | 2.71E-03 |
| 13 | GO:0005764: lysosome | 3.52E-03 |
| 14 | GO:0005773: vacuole | 3.58E-03 |
| 15 | GO:0005886: plasma membrane | 3.76E-03 |
| 16 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.81E-03 |
| 17 | GO:0005741: mitochondrial outer membrane | 5.02E-03 |
| 18 | GO:0016020: membrane | 5.64E-03 |
| 19 | GO:0000790: nuclear chromatin | 6.35E-03 |
| 20 | GO:0000145: exocyst | 8.56E-03 |
| 21 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 9.65E-03 |
| 22 | GO:0005778: peroxisomal membrane | 9.75E-03 |
| 23 | GO:0005788: endoplasmic reticulum lumen | 1.10E-02 |
| 24 | GO:0005794: Golgi apparatus | 1.45E-02 |
| 25 | GO:0031902: late endosome membrane | 1.70E-02 |
| 26 | GO:0005789: endoplasmic reticulum membrane | 2.34E-02 |
| 27 | GO:0005635: nuclear envelope | 2.34E-02 |
| 28 | GO:0010008: endosome membrane | 2.57E-02 |
| 29 | GO:0005834: heterotrimeric G-protein complex | 2.63E-02 |
| 30 | GO:0009706: chloroplast inner membrane | 2.87E-02 |
| 31 | GO:0005777: peroxisome | 3.29E-02 |
| 32 | GO:0005654: nucleoplasm | 3.30E-02 |
| 33 | GO:0005623: cell | 3.43E-02 |
| 34 | GO:0005615: extracellular space | 4.58E-02 |
| 35 | GO:0005802: trans-Golgi network | 4.58E-02 |