gene detail

Gene description

TAIR ID: AT3G54030

Short description: Protein kinase protein with tetratricopeptide repeat domain

Pathogen responsiveness: -0.79

General responsiveness: -1.65

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

brassinosteroid mediated signaling pathway, protein phosphorylation, cell surface receptor signaling pathway

GO cellular component

plasma membrane

GO molecular function

transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding

Protein domain

Pfam	PF07714, Protein tyrosine kinase

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

12 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 1 h	1.67	1.59E-04
GSE17464	Laer, control	Laer, Flg22 2 h	1.86	4.18E-05
GSE17464	Penta, control	Penta, Flg22 2 h	1.68	1.51E-04
GSE17464	Penta, control	Penta, Flg22 2 h	1.85	4.23E-05
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.97	1.69E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.53	3.66E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.91	1.91E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.80	7.41E-15
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.07	3.00E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.98	6.44E-15
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.76	9.09E-09
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.65	5.05E-07