co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G54030

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009268: response to pH	0.00E+00
2	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
3	GO:0097237: cellular response to toxic substance	0.00E+00
4	GO:0071669: plant-type cell wall organization or biogenesis	1.81E-06
5	GO:1903507: negative regulation of nucleic acid-templated transcription	7.68E-06
6	GO:0009611: response to wounding	2.20E-05
7	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.72E-05
8	GO:0002221: pattern recognition receptor signaling pathway	3.65E-05
9	GO:0000271: polysaccharide biosynthetic process	4.04E-05
10	GO:0030244: cellulose biosynthetic process	1.16E-04
11	GO:0009832: plant-type cell wall biogenesis	1.23E-04
12	GO:0045227: capsule polysaccharide biosynthetic process	1.37E-04
13	GO:0033358: UDP-L-arabinose biosynthetic process	1.37E-04
14	GO:0009753: response to jasmonic acid	1.66E-04
15	GO:0009699: phenylpropanoid biosynthetic process	4.16E-04
16	GO:0022900: electron transport chain	4.16E-04
17	GO:0055085: transmembrane transport	4.45E-04
18	GO:0010112: regulation of systemic acquired resistance	4.68E-04
19	GO:0010215: cellulose microfibril organization	5.78E-04
20	GO:0072593: reactive oxygen species metabolic process	6.34E-04
21	GO:0015770: sucrose transport	6.34E-04
22	GO:0010152: pollen maturation	6.93E-04
23	GO:0000266: mitochondrial fission	6.93E-04
24	GO:0018107: peptidyl-threonine phosphorylation	7.52E-04
25	GO:0071555: cell wall organization	7.97E-04
26	GO:0034605: cellular response to heat	8.13E-04
27	GO:0009225: nucleotide-sugar metabolic process	8.75E-04
28	GO:0005985: sucrose metabolic process	8.75E-04
29	GO:0009409: response to cold	1.15E-03
30	GO:0007005: mitochondrion organization	1.20E-03
31	GO:0006952: defense response	1.27E-03
32	GO:0006012: galactose metabolic process	1.27E-03
33	GO:0042631: cellular response to water deprivation	1.49E-03
34	GO:0071472: cellular response to salt stress	1.56E-03
35	GO:0010583: response to cyclopentenone	1.88E-03
36	GO:0009816: defense response to bacterium, incompatible interaction	2.39E-03
37	GO:0009607: response to biotic stimulus	2.39E-03
38	GO:0016049: cell growth	2.66E-03
39	GO:0008219: cell death	2.75E-03
40	GO:0048767: root hair elongation	2.84E-03
41	GO:0009813: flavonoid biosynthetic process	2.84E-03
42	GO:0009867: jasmonic acid mediated signaling pathway	3.22E-03
43	GO:0045087: innate immune response	3.22E-03
44	GO:0006839: mitochondrial transport	3.52E-03
45	GO:0009651: response to salt stress	3.60E-03
46	GO:0031347: regulation of defense response	4.36E-03
47	GO:0009809: lignin biosynthetic process	4.69E-03
48	GO:0009414: response to water deprivation	6.01E-03
49	GO:0018105: peptidyl-serine phosphorylation	6.10E-03
50	GO:0042742: defense response to bacterium	6.16E-03
51	GO:0007166: cell surface receptor signaling pathway	9.60E-03
52	GO:0009658: chloroplast organization	1.19E-02
53	GO:0007275: multicellular organism development	1.21E-02
54	GO:0006970: response to osmotic stress	1.25E-02
55	GO:0007049: cell cycle	1.28E-02
56	GO:0006351: transcription, DNA-templated	1.28E-02
57	GO:0080167: response to karrikin	1.38E-02
58	GO:0046777: protein autophosphorylation	1.45E-02
59	GO:0009751: response to salicylic acid	1.80E-02
60	GO:0008152: metabolic process	1.95E-02
61	GO:0009873: ethylene-activated signaling pathway	2.19E-02
62	GO:0009908: flower development	2.55E-02
63	GO:0006355: regulation of transcription, DNA-templated	2.58E-02
64	GO:0009555: pollen development	2.74E-02
65	GO:0035556: intracellular signal transduction	2.85E-02
66	GO:0051301: cell division	2.92E-02
67	GO:0045893: positive regulation of transcription, DNA-templated	3.03E-02

Rank	GO Term	Adjusted P value
1	GO:0051753: mannan synthase activity	1.29E-06
2	GO:0003714: transcription corepressor activity	1.91E-05
3	GO:0016760: cellulose synthase (UDP-forming) activity	3.02E-05
4	GO:0016759: cellulose synthase activity	7.06E-05
5	GO:0050373: UDP-arabinose 4-epimerase activity	1.37E-04
6	GO:0003978: UDP-glucose 4-epimerase activity	2.68E-04
7	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.68E-04
8	GO:0008506: sucrose:proton symporter activity	3.15E-04
9	GO:0052747: sinapyl alcohol dehydrogenase activity	3.65E-04
10	GO:0016207: 4-coumarate-CoA ligase activity	4.68E-04
11	GO:0047617: acyl-CoA hydrolase activity	5.23E-04
12	GO:0015144: carbohydrate transmembrane transporter activity	5.65E-04
13	GO:0005351: sugar:proton symporter activity	6.33E-04
14	GO:0008515: sucrose transmembrane transporter activity	6.34E-04
15	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.93E-04
16	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.13E-04
17	GO:0008514: organic anion transmembrane transporter activity	1.34E-03
18	GO:0016853: isomerase activity	1.64E-03
19	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.13E-03
20	GO:0051213: dioxygenase activity	2.30E-03
21	GO:0051537: 2 iron, 2 sulfur cluster binding	4.04E-03
22	GO:0015293: symporter activity	4.15E-03
23	GO:0016874: ligase activity	5.74E-03
24	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.32E-03
25	GO:0008017: microtubule binding	9.02E-03
26	GO:0004672: protein kinase activity	9.04E-03
27	GO:0016788: hydrolase activity, acting on ester bonds	1.20E-02
28	GO:0005515: protein binding	1.43E-02
29	GO:0042803: protein homodimerization activity	1.62E-02
30	GO:0003924: GTPase activity	1.82E-02
31	GO:0009055: electron carrier activity	1.92E-02
32	GO:0016757: transferase activity, transferring glycosyl groups	2.10E-02
33	GO:0004674: protein serine/threonine kinase activity	3.05E-02
34	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.34E-02
35	GO:0005507: copper ion binding	3.53E-02
36	GO:0005516: calmodulin binding	3.67E-02
37	GO:0005525: GTP binding	3.91E-02
38	GO:0003824: catalytic activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0030173: integral component of Golgi membrane	2.68E-04
2	GO:0016363: nuclear matrix	2.68E-04
3	GO:0005886: plasma membrane	4.89E-04
4	GO:0005938: cell cortex	7.52E-04
5	GO:0009504: cell plate	1.72E-03
6	GO:0016592: mediator complex	1.88E-03
7	GO:0032580: Golgi cisterna membrane	2.04E-03
8	GO:0090406: pollen tube	3.83E-03
9	GO:0005802: trans-Golgi network	4.88E-03
10	GO:0005768: endosome	5.54E-03
11	GO:0009524: phragmoplast	7.25E-03
12	GO:0005794: Golgi apparatus	7.49E-03
13	GO:0009705: plant-type vacuole membrane	8.74E-03
14	GO:0046658: anchored component of plasma membrane	1.06E-02
15	GO:0005874: microtubule	1.35E-02
16	GO:0005743: mitochondrial inner membrane	1.73E-02
17	GO:0005618: cell wall	2.45E-02
18	GO:0031225: anchored component of membrane	3.77E-02
19	GO:0016020: membrane	3.82E-02
20	GO:0005622: intracellular	4.13E-02