co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G54030

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	0.00E+00
2	GO:0010306: rhamnogalacturonan II biosynthetic process	8.75E-07
3	GO:0031338: regulation of vesicle fusion	3.77E-05
4	GO:0006833: water transport	7.33E-05
5	GO:0007017: microtubule-based process	9.26E-05
6	GO:0010541: acropetal auxin transport	9.40E-05
7	GO:0034220: ion transmembrane transport	1.63E-04
8	GO:0090630: activation of GTPase activity	1.63E-04
9	GO:2001295: malonyl-CoA biosynthetic process	1.63E-04
10	GO:0010160: formation of animal organ boundary	1.63E-04
11	GO:0048868: pollen tube development	1.77E-04
12	GO:0080170: hydrogen peroxide transmembrane transport	2.40E-04
13	GO:0043481: anthocyanin accumulation in tissues in response to UV light	2.40E-04
14	GO:0051016: barbed-end actin filament capping	2.40E-04
15	GO:0060918: auxin transport	5.07E-04
16	GO:0051693: actin filament capping	7.07E-04
17	GO:0009664: plant-type cell wall organization	8.40E-04
18	GO:0000902: cell morphogenesis	1.04E-03
19	GO:0009638: phototropism	1.15E-03
20	GO:0009684: indoleacetic acid biosynthetic process	1.40E-03
21	GO:0046856: phosphatidylinositol dephosphorylation	1.40E-03
22	GO:0008361: regulation of cell size	1.53E-03
23	GO:0030036: actin cytoskeleton organization	1.67E-03
24	GO:0009785: blue light signaling pathway	1.67E-03
25	GO:0007015: actin filament organization	1.81E-03
26	GO:0010540: basipetal auxin transport	1.81E-03
27	GO:0055085: transmembrane transport	2.13E-03
28	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.89E-03
29	GO:0048443: stamen development	3.05E-03
30	GO:0006284: base-excision repair	3.05E-03
31	GO:0009860: pollen tube growth	3.52E-03
32	GO:0009958: positive gravitropism	3.58E-03
33	GO:0009723: response to ethylene	3.78E-03
34	GO:0071554: cell wall organization or biogenesis	4.13E-03
35	GO:0071281: cellular response to iron ion	4.51E-03
36	GO:0009639: response to red or far red light	4.70E-03
37	GO:0009828: plant-type cell wall loosening	4.70E-03
38	GO:0010218: response to far red light	6.82E-03
39	GO:0048527: lateral root development	7.05E-03
40	GO:0016051: carbohydrate biosynthetic process	7.51E-03
41	GO:0009637: response to blue light	7.51E-03
42	GO:0009926: auxin polar transport	8.96E-03
43	GO:0009640: photomorphogenesis	8.96E-03
44	GO:0006486: protein glycosylation	1.11E-02
45	GO:0009624: response to nematode	1.42E-02
46	GO:0009742: brassinosteroid mediated signaling pathway	1.48E-02
47	GO:0009651: response to salt stress	1.78E-02
48	GO:0006633: fatty acid biosynthetic process	1.95E-02
49	GO:0045490: pectin catabolic process	2.09E-02
50	GO:0009739: response to gibberellin	2.26E-02
51	GO:0009733: response to auxin	2.41E-02
52	GO:0009826: unidimensional cell growth	2.78E-02
53	GO:0006810: transport	3.16E-02
54	GO:0006886: intracellular protein transport	3.86E-02
55	GO:0016042: lipid catabolic process	4.30E-02
56	GO:0009408: response to heat	4.39E-02
57	GO:0006281: DNA repair	4.39E-02
58	GO:0007165: signal transduction	4.46E-02
59	GO:0048364: root development	4.52E-02
60	GO:0009753: response to jasmonic acid	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
2	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	0.00E+00
3	GO:0004075: biotin carboxylase activity	1.63E-04
4	GO:0004445: inositol-polyphosphate 5-phosphatase activity	2.40E-04
5	GO:0005200: structural constituent of cytoskeleton	2.87E-04
6	GO:0015250: water channel activity	3.23E-04
7	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	3.24E-04
8	GO:0003989: acetyl-CoA carboxylase activity	4.13E-04
9	GO:0008725: DNA-3-methyladenine glycosylase activity	4.13E-04
10	GO:0017137: Rab GTPase binding	4.13E-04
11	GO:0004040: amidase activity	4.13E-04
12	GO:0005096: GTPase activator activity	4.41E-04
13	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	5.07E-04
14	GO:0004033: aldo-keto reductase (NADP) activity	8.13E-04
15	GO:0015020: glucuronosyltransferase activity	1.28E-03
16	GO:0008378: galactosyltransferase activity	1.53E-03
17	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.53E-03
18	GO:0010329: auxin efflux transmembrane transporter activity	1.67E-03
19	GO:0016829: lyase activity	1.68E-03
20	GO:0030570: pectate lyase activity	2.89E-03
21	GO:0019901: protein kinase binding	3.94E-03
22	GO:0051015: actin filament binding	4.51E-03
23	GO:0004871: signal transducer activity	5.07E-03
24	GO:0016413: O-acetyltransferase activity	5.11E-03
25	GO:0016491: oxidoreductase activity	5.45E-03
26	GO:0008375: acetylglucosaminyltransferase activity	5.73E-03
27	GO:0003924: GTPase activity	5.96E-03
28	GO:0004712: protein serine/threonine/tyrosine kinase activity	7.99E-03
29	GO:0051537: 2 iron, 2 sulfur cluster binding	9.47E-03
30	GO:0003777: microtubule motor activity	1.19E-02
31	GO:0031625: ubiquitin protein ligase binding	1.19E-02
32	GO:0004650: polygalacturonase activity	1.33E-02
33	GO:0005516: calmodulin binding	1.59E-02
34	GO:0016758: transferase activity, transferring hexosyl groups	1.63E-02
35	GO:0005525: GTP binding	1.74E-02
36	GO:0008017: microtubule binding	2.16E-02
37	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.48E-02
38	GO:0016788: hydrolase activity, acting on ester bonds	2.89E-02
39	GO:0052689: carboxylic ester hydrolase activity	3.57E-02
40	GO:0016787: hydrolase activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0008290: F-actin capping protein complex	9.40E-05
2	GO:0015630: microtubule cytoskeleton	2.40E-04
3	GO:0009531: secondary cell wall	2.40E-04
4	GO:0005874: microtubule	4.59E-04
5	GO:0045298: tubulin complex	1.04E-03
6	GO:0005884: actin filament	1.40E-03
7	GO:0005875: microtubule associated complex	2.10E-03
8	GO:0005886: plasma membrane	2.69E-03
9	GO:0009505: plant-type cell wall	5.11E-03
10	GO:0005618: cell wall	5.28E-03
11	GO:0005819: spindle	7.99E-03
12	GO:0005887: integral component of plasma membrane	8.08E-03
13	GO:0012505: endomembrane system	1.39E-02
14	GO:0005622: intracellular	1.88E-02
15	GO:0046658: anchored component of plasma membrane	2.55E-02
16	GO:0000139: Golgi membrane	2.91E-02
17	GO:0009570: chloroplast stroma	4.11E-02