Gene: AT3G53700
Gene description
TAIR ID: AT3G53700
Short description: Pentatricopeptide repeat (PPR) superfamily protein
Pathogen responsiveness: -0.16
General responsiveness: 0.05
GO biological process
RNA modification, embryo development ending in seed dormancy
GO cellular component
mitochondrion, chloroplast
GO molecular function
endonuclease activity, RNA binding
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
17 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE11807 | Col, erf104 ko, water 4 h | Col, erf104 ko, Flg22 4 h | -1.76 | 6.00E-03 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | -1.53 | 6.94E-05 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -1.97 | 1.14E-05 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -1.80 | 3.78E-05 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -2.54 | 4.50E-10 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | -2.07 | 1.23E-06 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.74 | 5.30E-03 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -2.43 | 1.08E-13 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | -1.71 | 6.57E-11 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -2.21 | 6.15E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.72 | 1.95E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -1.73 | 1.25E-11 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -2.20 | 7.12E-13 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -1.63 | 1.91E-04 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -2.41 | 4.48E-08 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | -1.55 | 1.61E-09 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -1.53 | 3.63E-03 |
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