Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G53700

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070125: mitochondrial translational elongation0.00E+00
2GO:0090071: negative regulation of ribosome biogenesis0.00E+00
3GO:0042407: cristae formation0.00E+00
4GO:0051085: chaperone mediated protein folding requiring cofactor3.21E-07
5GO:0006568: tryptophan metabolic process5.37E-05
6GO:0006423: cysteinyl-tRNA aminoacylation5.37E-05
7GO:0006457: protein folding9.13E-05
8GO:0051604: protein maturation9.50E-05
9GO:0006760: folic acid-containing compound metabolic process9.50E-05
10GO:0006986: response to unfolded protein1.42E-04
11GO:0046656: folic acid biosynthetic process1.95E-04
12GO:0006655: phosphatidylglycerol biosynthetic process3.11E-04
13GO:0042793: transcription from plastid promoter3.11E-04
14GO:0017148: negative regulation of translation3.73E-04
15GO:0046654: tetrahydrofolate biosynthetic process3.73E-04
16GO:0042026: protein refolding3.73E-04
17GO:0052543: callose deposition in cell wall5.05E-04
18GO:0043067: regulation of programmed cell death7.18E-04
19GO:0006779: porphyrin-containing compound biosynthetic process7.18E-04
20GO:0045036: protein targeting to chloroplast7.94E-04
21GO:0006782: protoporphyrinogen IX biosynthetic process7.94E-04
22GO:0016024: CDP-diacylglycerol biosynthetic process9.50E-04
23GO:0007005: mitochondrion organization1.66E-03
24GO:0010197: polar nucleus fusion2.17E-03
25GO:0008654: phospholipid biosynthetic process2.39E-03
26GO:0010027: thylakoid membrane organization3.21E-03
27GO:0009627: systemic acquired resistance3.45E-03
28GO:0015995: chlorophyll biosynthetic process3.58E-03
29GO:0008219: cell death3.84E-03
30GO:0043086: negative regulation of catalytic activity7.40E-03
31GO:0006414: translational elongation7.47E-03
32GO:0006413: translational initiation1.18E-02
33GO:0009451: RNA modification1.26E-02
34GO:0015031: protein transport1.29E-02
35GO:0009658: chloroplast organization1.68E-02
36GO:0048366: leaf development1.89E-02
37GO:0008152: metabolic process2.78E-02
38GO:0045893: positive regulation of transcription, DNA-templated4.30E-02
RankGO TermAdjusted P value
1GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity2.08E-05
2GO:0004425: indole-3-glycerol-phosphate synthase activity2.08E-05
3GO:0051087: chaperone binding3.93E-05
4GO:0004150: dihydroneopterin aldolase activity5.37E-05
5GO:0102083: 7,8-dihydromonapterin aldolase activity5.37E-05
6GO:0004817: cysteine-tRNA ligase activity5.37E-05
7GO:0043023: ribosomal large subunit binding1.42E-04
8GO:0001872: (1->3)-beta-D-glucan binding1.42E-04
9GO:0016851: magnesium chelatase activity1.42E-04
10GO:0003746: translation elongation factor activity2.53E-04
11GO:0004605: phosphatidate cytidylyltransferase activity3.11E-04
12GO:0051082: unfolded protein binding6.19E-04
13GO:0044183: protein binding involved in protein folding8.71E-04
14GO:0042803: protein homodimerization activity2.43E-03
15GO:0008483: transaminase activity2.96E-03
16GO:0030247: polysaccharide binding3.58E-03
17GO:0008236: serine-type peptidase activity3.71E-03
18GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.84E-03
19GO:0003755: peptidyl-prolyl cis-trans isomerase activity5.97E-03
20GO:0016758: transferase activity, transferring hexosyl groups9.67E-03
21GO:0030170: pyridoxal phosphate binding1.06E-02
22GO:0046910: pectinesterase inhibitor activity1.18E-02
23GO:0008194: UDP-glycosyltransferase activity1.34E-02
24GO:0003743: translation initiation factor activity1.38E-02
25GO:0042802: identical protein binding1.46E-02
26GO:0003729: mRNA binding1.51E-02
27GO:0008233: peptidase activity1.94E-02
28GO:0003924: GTPase activity2.59E-02
29GO:0004519: endonuclease activity2.75E-02
30GO:0016887: ATPase activity3.54E-02
31GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.75E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast7.48E-20
2GO:0009941: chloroplast envelope5.07E-14
3GO:0009570: chloroplast stroma4.07E-13
4GO:0009508: plastid chromosome2.01E-05
5GO:0005759: mitochondrial matrix5.98E-05
6GO:0009295: nucleoid1.31E-04
7GO:0009526: plastid envelope1.95E-04
8GO:0055035: plastid thylakoid membrane2.51E-04
9GO:0009535: chloroplast thylakoid membrane7.07E-04
10GO:0009536: plastid1.92E-03
11GO:0010319: stromule2.96E-03
12GO:0009707: chloroplast outer membrane3.84E-03
13GO:0009706: chloroplast inner membrane8.42E-03
14GO:0005623: cell1.00E-02
15GO:0046658: anchored component of plasma membrane1.51E-02
16GO:0031969: chloroplast membrane1.96E-02
17GO:0022626: cytosolic ribosome3.78E-02
18GO:0005739: mitochondrion4.17E-02
19GO:0009534: chloroplast thylakoid4.46E-02
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Gene type



Gene DE type