gene detail

Gene description

TAIR ID: AT3G49680

Short description: branched-chain aminotransferase 3

Pathogen responsiveness: -1.14

General responsiveness: -1.21

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G071208

Wheat: No orthologous gene

GO biological process

valine biosynthetic process, isoleucine biosynthetic process, branched-chain amino acid biosynthetic process, leucine biosynthetic process

GO cellular component

chloroplast, chloroplast stroma

GO molecular function

L-valine transaminase activity, L-isoleucine transaminase activity, L-leucine transaminase activity, branched-chain-amino-acid transaminase activity, catalytic activity

Protein domain

Pfam	PF01063, Amino-transferase class IV

Metabolic pathway

LEUSYN-PWY: leucine biosynthesis
PWYQT-4471: glucosinolate biosynthesis from dihomomethionine
ILE-VAL-PWY: superpathway of isoleucine and valine biosynthesis
BRANCHED-CHAIN-AA-SYN-PWY: superpathway of leucine, valine, and isoleucine biosynthesis
PWY-1186: homomethionine biosynthesis
ILEUSYN-PWY: isoleucine biosynthesis I (from threonine)
VALDEG-PWY: valine degradation I
PWY-3001: isoleucine biosynthesis I
ILEUDEG-PWY: isoleucine degradation I
LEU-DEG2-PWY: leucine degradation I
VALSYN-PWY: valine biosynthesis

KEGG pathway

PATH:ath01210: 2-Oxocarboxylic acid metabolism
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00270: Cysteine and methionine metabolism
PATH:ath00280: Valine, leucine and isoleucine degradation
PATH:ath00290: Valine, leucine and isoleucine biosynthesis
PATH:ath00770: Pantothenate and CoA biosynthesis
PATH:ath00966: Glucosinolate biosynthesis

Transcriptional regulation

No regulation information

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.69	2.83E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.65	1.67E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.55	4.48E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.79	1.69E-09
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.03	1.13E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.76	1.11E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.55	8.34E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.76	8.94E-13