Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G49680

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090470: shoot organ boundary specification0.00E+00
2GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
3GO:0030388: fructose 1,6-bisphosphate metabolic process2.19E-05
4GO:0010270: photosystem II oxygen evolving complex assembly2.19E-05
5GO:0034755: iron ion transmembrane transport2.19E-05
6GO:0006000: fructose metabolic process3.99E-05
7GO:0010027: thylakoid membrane organization4.09E-05
8GO:0010371: regulation of gibberellin biosynthetic process6.14E-05
9GO:0006828: manganese ion transport1.41E-04
10GO:0010196: nonphotochemical quenching2.04E-04
11GO:0048564: photosystem I assembly2.37E-04
12GO:0006002: fructose 6-phosphate metabolic process2.71E-04
13GO:0071482: cellular response to light stimulus2.71E-04
14GO:0034765: regulation of ion transmembrane transport3.07E-04
15GO:0009098: leucine biosynthetic process3.43E-04
16GO:0006879: cellular iron ion homeostasis4.19E-04
17GO:0009750: response to fructose4.19E-04
18GO:0006816: calcium ion transport4.19E-04
19GO:0008285: negative regulation of cell proliferation4.19E-04
20GO:0005983: starch catabolic process4.58E-04
21GO:0006094: gluconeogenesis4.98E-04
22GO:0005986: sucrose biosynthetic process4.98E-04
23GO:0090351: seedling development5.80E-04
24GO:0010073: meristem maintenance7.09E-04
25GO:0010227: floral organ abscission8.44E-04
26GO:0042391: regulation of membrane potential9.85E-04
27GO:0008152: metabolic process1.03E-03
28GO:0071805: potassium ion transmembrane transport1.39E-03
29GO:0016311: dephosphorylation1.73E-03
30GO:0009640: photomorphogenesis2.49E-03
31GO:0006364: rRNA processing3.04E-03
32GO:0006813: potassium ion transport3.04E-03
33GO:0010228: vegetative to reproductive phase transition of meristem5.79E-03
34GO:0042254: ribosome biogenesis7.69E-03
35GO:0015979: photosynthesis9.68E-03
36GO:0045454: cell redox homeostasis1.00E-02
37GO:0055085: transmembrane transport2.06E-02
38GO:0009737: response to abscisic acid4.94E-02
RankGO TermAdjusted P value
1GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
2GO:0003862: 3-isopropylmalate dehydrogenase activity2.19E-05
3GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity2.19E-05
4GO:0005242: inward rectifier potassium channel activity1.71E-04
5GO:0043022: ribosome binding2.37E-04
6GO:0005381: iron ion transmembrane transporter activity3.43E-04
7GO:0005384: manganese ion transmembrane transporter activity3.43E-04
8GO:0015386: potassium:proton antiporter activity4.19E-04
9GO:0015095: magnesium ion transmembrane transporter activity4.98E-04
10GO:0005528: FK506 binding6.66E-04
11GO:0015079: potassium ion transmembrane transporter activity7.09E-04
12GO:0030551: cyclic nucleotide binding9.85E-04
13GO:0008237: metallopeptidase activity1.39E-03
14GO:0004721: phosphoprotein phosphatase activity1.67E-03
15GO:0004222: metalloendopeptidase activity1.91E-03
16GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.76E-03
17GO:0051287: NAD binding2.83E-03
18GO:0042626: ATPase activity, coupled to transmembrane movement of substances6.62E-03
19GO:0042802: identical protein binding6.62E-03
20GO:0016787: hydrolase activity6.89E-03
21GO:0000287: magnesium ion binding7.49E-03
22GO:0005509: calcium ion binding2.72E-02
23GO:0003824: catalytic activity3.08E-02
24GO:0005215: transporter activity3.10E-02
25GO:0005515: protein binding4.19E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast6.51E-08
2GO:0031969: chloroplast membrane3.12E-05
3GO:0009570: chloroplast stroma7.23E-05
4GO:0031977: thylakoid lumen8.92E-05
5GO:0009535: chloroplast thylakoid membrane1.02E-04
6GO:0009543: chloroplast thylakoid lumen2.49E-04
7GO:0030095: chloroplast photosystem II5.39E-04
8GO:0042651: thylakoid membrane7.09E-04
9GO:0009654: photosystem II oxygen evolving complex7.09E-04
10GO:0019898: extrinsic component of membrane1.13E-03
11GO:0009579: thylakoid1.93E-03
12GO:0009534: chloroplast thylakoid1.95E-03
13GO:0005887: integral component of plasma membrane1.44E-02
14GO:0009941: chloroplast envelope1.52E-02
15GO:0016021: integral component of membrane2.32E-02
16GO:0005840: ribosome2.98E-02
17GO:0009536: plastid3.33E-02
Gene type



Gene DE type