gene detail

Gene description

TAIR ID: AT3G49470

Short description: nascent polypeptide-associated complex subunit alpha-like protein 2

Pathogen responsiveness: -0.25

General responsiveness: -0.05

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G171466

Wheat: No orthologous gene

GO biological process

protein transport

GO cellular component

cytosol, nucleus, nascent polypeptide-associated complex

GO molecular function

molecular_function

Protein domain

Pfam	PF01849, NAC domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G41315

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

18 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.98	1.81E-03
GSE17464	Laer, control	Laer, Flg22 2 h	-2.00	5.08E-04
GSE17464	Penta, control	Penta, Flg22 2 h	-2.36	6.16E-05
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.72	1.80E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.86	5.74E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.94	5.91E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.37	4.44E-11
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.85	3.40E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.58	8.71E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.83	1.70E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.78	2.18E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.60	1.03E-08
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.50	1.31E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.19	2.96E-15
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.24	9.26E-08
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.95	8.78E-12
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.63	2.62E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.99	3.87E-06