GO Enrichment Analysis of Co-expressed Genes with
AT3G49470
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
2 | GO:0042407: cristae formation | 0.00E+00 |
3 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
4 | GO:0006573: valine metabolic process | 0.00E+00 |
5 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
6 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
7 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
8 | GO:0009735: response to cytokinin | 3.54E-05 |
9 | GO:0006412: translation | 4.15E-05 |
10 | GO:0006546: glycine catabolic process | 5.13E-05 |
11 | GO:0015976: carbon utilization | 5.13E-05 |
12 | GO:0010190: cytochrome b6f complex assembly | 1.18E-04 |
13 | GO:0042549: photosystem II stabilization | 1.18E-04 |
14 | GO:0061077: chaperone-mediated protein folding | 1.24E-04 |
15 | GO:0042026: protein refolding | 1.62E-04 |
16 | GO:0016117: carotenoid biosynthetic process | 2.04E-04 |
17 | GO:0000413: protein peptidyl-prolyl isomerization | 2.27E-04 |
18 | GO:0006551: leucine metabolic process | 2.77E-04 |
19 | GO:0032544: plastid translation | 3.32E-04 |
20 | GO:0006457: protein folding | 4.61E-04 |
21 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.74E-04 |
22 | GO:0009658: chloroplast organization | 4.89E-04 |
23 | GO:0042254: ribosome biogenesis | 5.05E-04 |
24 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.52E-04 |
25 | GO:0006695: cholesterol biosynthetic process | 6.09E-04 |
26 | GO:0006423: cysteinyl-tRNA aminoacylation | 6.09E-04 |
27 | GO:2000123: positive regulation of stomatal complex development | 6.09E-04 |
28 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 6.09E-04 |
29 | GO:0043039: tRNA aminoacylation | 6.09E-04 |
30 | GO:0009773: photosynthetic electron transport in photosystem I | 6.38E-04 |
31 | GO:0006415: translational termination | 6.38E-04 |
32 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.38E-04 |
33 | GO:0015979: photosynthesis | 9.04E-04 |
34 | GO:0010020: chloroplast fission | 9.28E-04 |
35 | GO:0010207: photosystem II assembly | 9.28E-04 |
36 | GO:0006518: peptide metabolic process | 9.88E-04 |
37 | GO:0006696: ergosterol biosynthetic process | 9.88E-04 |
38 | GO:0080147: root hair cell development | 1.27E-03 |
39 | GO:0019344: cysteine biosynthetic process | 1.27E-03 |
40 | GO:0006418: tRNA aminoacylation for protein translation | 1.40E-03 |
41 | GO:0006241: CTP biosynthetic process | 1.41E-03 |
42 | GO:0006165: nucleoside diphosphate phosphorylation | 1.41E-03 |
43 | GO:0006228: UTP biosynthetic process | 1.41E-03 |
44 | GO:0001678: cellular glucose homeostasis | 1.41E-03 |
45 | GO:0043572: plastid fission | 1.41E-03 |
46 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.41E-03 |
47 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.41E-03 |
48 | GO:0010239: chloroplast mRNA processing | 1.41E-03 |
49 | GO:2000122: negative regulation of stomatal complex development | 1.89E-03 |
50 | GO:2000038: regulation of stomatal complex development | 1.89E-03 |
51 | GO:0010037: response to carbon dioxide | 1.89E-03 |
52 | GO:0006808: regulation of nitrogen utilization | 1.89E-03 |
53 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.89E-03 |
54 | GO:0009765: photosynthesis, light harvesting | 1.89E-03 |
55 | GO:0006183: GTP biosynthetic process | 1.89E-03 |
56 | GO:0010375: stomatal complex patterning | 2.41E-03 |
57 | GO:0016120: carotene biosynthetic process | 2.41E-03 |
58 | GO:0010236: plastoquinone biosynthetic process | 2.41E-03 |
59 | GO:0031365: N-terminal protein amino acid modification | 2.41E-03 |
60 | GO:0016123: xanthophyll biosynthetic process | 2.41E-03 |
61 | GO:0009793: embryo development ending in seed dormancy | 2.70E-03 |
62 | GO:0006810: transport | 2.87E-03 |
63 | GO:0010358: leaf shaping | 2.98E-03 |
64 | GO:0016554: cytidine to uridine editing | 2.98E-03 |
65 | GO:0006796: phosphate-containing compound metabolic process | 2.98E-03 |
66 | GO:0006014: D-ribose metabolic process | 2.98E-03 |
67 | GO:0046835: carbohydrate phosphorylation | 3.58E-03 |
68 | GO:0042372: phylloquinone biosynthetic process | 3.58E-03 |
69 | GO:0009612: response to mechanical stimulus | 3.58E-03 |
70 | GO:0009082: branched-chain amino acid biosynthetic process | 3.58E-03 |
71 | GO:0006458: 'de novo' protein folding | 3.58E-03 |
72 | GO:0009099: valine biosynthetic process | 3.58E-03 |
73 | GO:0009854: oxidative photosynthetic carbon pathway | 3.58E-03 |
74 | GO:0010555: response to mannitol | 3.58E-03 |
75 | GO:0042742: defense response to bacterium | 4.12E-03 |
76 | GO:0009645: response to low light intensity stimulus | 4.23E-03 |
77 | GO:0009642: response to light intensity | 4.90E-03 |
78 | GO:0015995: chlorophyll biosynthetic process | 5.26E-03 |
79 | GO:0009657: plastid organization | 5.62E-03 |
80 | GO:0009097: isoleucine biosynthetic process | 5.62E-03 |
81 | GO:0009932: cell tip growth | 5.62E-03 |
82 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 5.62E-03 |
83 | GO:0045337: farnesyl diphosphate biosynthetic process | 6.37E-03 |
84 | GO:0010206: photosystem II repair | 6.37E-03 |
85 | GO:0033384: geranyl diphosphate biosynthetic process | 6.37E-03 |
86 | GO:0006783: heme biosynthetic process | 6.37E-03 |
87 | GO:1900865: chloroplast RNA modification | 7.15E-03 |
88 | GO:0043067: regulation of programmed cell death | 7.15E-03 |
89 | GO:0016051: carbohydrate biosynthetic process | 7.40E-03 |
90 | GO:0009409: response to cold | 7.46E-03 |
91 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 7.97E-03 |
92 | GO:0006535: cysteine biosynthetic process from serine | 7.97E-03 |
93 | GO:0019684: photosynthesis, light reaction | 8.82E-03 |
94 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.82E-03 |
95 | GO:0043085: positive regulation of catalytic activity | 8.82E-03 |
96 | GO:0045037: protein import into chloroplast stroma | 9.70E-03 |
97 | GO:0006790: sulfur compound metabolic process | 9.70E-03 |
98 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.06E-02 |
99 | GO:0009767: photosynthetic electron transport chain | 1.06E-02 |
100 | GO:0019253: reductive pentose-phosphate cycle | 1.16E-02 |
101 | GO:0046854: phosphatidylinositol phosphorylation | 1.25E-02 |
102 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.35E-02 |
103 | GO:0006508: proteolysis | 1.40E-02 |
104 | GO:0000027: ribosomal large subunit assembly | 1.46E-02 |
105 | GO:0006096: glycolytic process | 1.53E-02 |
106 | GO:0007017: microtubule-based process | 1.56E-02 |
107 | GO:0007005: mitochondrion organization | 1.78E-02 |
108 | GO:0080092: regulation of pollen tube growth | 1.78E-02 |
109 | GO:0045454: cell redox homeostasis | 1.84E-02 |
110 | GO:0009411: response to UV | 1.89E-02 |
111 | GO:0000271: polysaccharide biosynthetic process | 2.25E-02 |
112 | GO:0045489: pectin biosynthetic process | 2.37E-02 |
113 | GO:0008360: regulation of cell shape | 2.37E-02 |
114 | GO:0006662: glycerol ether metabolic process | 2.37E-02 |
115 | GO:0010197: polar nucleus fusion | 2.37E-02 |
116 | GO:0009741: response to brassinosteroid | 2.37E-02 |
117 | GO:0010268: brassinosteroid homeostasis | 2.37E-02 |
118 | GO:0055114: oxidation-reduction process | 2.46E-02 |
119 | GO:0007018: microtubule-based movement | 2.50E-02 |
120 | GO:0019252: starch biosynthetic process | 2.63E-02 |
121 | GO:0016132: brassinosteroid biosynthetic process | 2.76E-02 |
122 | GO:0046686: response to cadmium ion | 2.81E-02 |
123 | GO:0006633: fatty acid biosynthetic process | 2.90E-02 |
124 | GO:0016125: sterol metabolic process | 3.16E-02 |
125 | GO:0071805: potassium ion transmembrane transport | 3.30E-02 |
126 | GO:0007267: cell-cell signaling | 3.30E-02 |
127 | GO:0010027: thylakoid membrane organization | 3.58E-02 |
128 | GO:0016126: sterol biosynthetic process | 3.58E-02 |
129 | GO:0008380: RNA splicing | 3.79E-02 |
130 | GO:0009627: systemic acquired resistance | 3.87E-02 |
131 | GO:0042128: nitrate assimilation | 3.87E-02 |
132 | GO:0010411: xyloglucan metabolic process | 4.02E-02 |
133 | GO:0071555: cell wall organization | 4.02E-02 |
134 | GO:0009817: defense response to fungus, incompatible interaction | 4.33E-02 |
135 | GO:0048481: plant ovule development | 4.33E-02 |
136 | GO:0008219: cell death | 4.33E-02 |
137 | GO:0000160: phosphorelay signal transduction system | 4.48E-02 |
138 | GO:0009407: toxin catabolic process | 4.64E-02 |
139 | GO:0009826: unidimensional cell growth | 4.72E-02 |
140 | GO:0010119: regulation of stomatal movement | 4.79E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
2 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
3 | GO:0008887: glycerate kinase activity | 0.00E+00 |
4 | GO:0046905: phytoene synthase activity | 0.00E+00 |
5 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
6 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
7 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
8 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
9 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.19E-11 |
11 | GO:0019843: rRNA binding | 1.53E-09 |
12 | GO:0003735: structural constituent of ribosome | 1.50E-06 |
13 | GO:0005528: FK506 binding | 3.08E-06 |
14 | GO:0016149: translation release factor activity, codon specific | 2.85E-05 |
15 | GO:0051920: peroxiredoxin activity | 1.62E-04 |
16 | GO:0004033: aldo-keto reductase (NADP) activity | 2.69E-04 |
17 | GO:0016209: antioxidant activity | 2.69E-04 |
18 | GO:0004831: tyrosine-tRNA ligase activity | 2.77E-04 |
19 | GO:0004655: porphobilinogen synthase activity | 2.77E-04 |
20 | GO:0051996: squalene synthase activity | 2.77E-04 |
21 | GO:0003838: sterol 24-C-methyltransferase activity | 2.77E-04 |
22 | GO:0003984: acetolactate synthase activity | 2.77E-04 |
23 | GO:0010012: steroid 22-alpha hydroxylase activity | 2.77E-04 |
24 | GO:0003747: translation release factor activity | 3.99E-04 |
25 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 6.09E-04 |
26 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 6.09E-04 |
27 | GO:0050017: L-3-cyanoalanine synthase activity | 6.09E-04 |
28 | GO:0042389: omega-3 fatty acid desaturase activity | 6.09E-04 |
29 | GO:0004618: phosphoglycerate kinase activity | 6.09E-04 |
30 | GO:0004047: aminomethyltransferase activity | 6.09E-04 |
31 | GO:0004817: cysteine-tRNA ligase activity | 6.09E-04 |
32 | GO:0044183: protein binding involved in protein folding | 6.38E-04 |
33 | GO:0004089: carbonate dehydratase activity | 8.26E-04 |
34 | GO:0004222: metalloendopeptidase activity | 8.56E-04 |
35 | GO:0017150: tRNA dihydrouridine synthase activity | 9.88E-04 |
36 | GO:0002161: aminoacyl-tRNA editing activity | 9.88E-04 |
37 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.88E-04 |
38 | GO:0030267: glyoxylate reductase (NADP) activity | 9.88E-04 |
39 | GO:0004550: nucleoside diphosphate kinase activity | 1.41E-03 |
40 | GO:0008097: 5S rRNA binding | 1.41E-03 |
41 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.41E-03 |
42 | GO:0005536: glucose binding | 1.89E-03 |
43 | GO:0004396: hexokinase activity | 1.89E-03 |
44 | GO:0019158: mannokinase activity | 1.89E-03 |
45 | GO:0005319: lipid transporter activity | 1.89E-03 |
46 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.89E-03 |
47 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.89E-03 |
48 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.89E-03 |
49 | GO:0004812: aminoacyl-tRNA ligase activity | 2.16E-03 |
50 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.41E-03 |
51 | GO:0016208: AMP binding | 2.98E-03 |
52 | GO:0016462: pyrophosphatase activity | 2.98E-03 |
53 | GO:0008200: ion channel inhibitor activity | 2.98E-03 |
54 | GO:0080030: methyl indole-3-acetate esterase activity | 2.98E-03 |
55 | GO:0051082: unfolded protein binding | 3.19E-03 |
56 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.58E-03 |
57 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.58E-03 |
58 | GO:0004747: ribokinase activity | 3.58E-03 |
59 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.58E-03 |
60 | GO:0004124: cysteine synthase activity | 3.58E-03 |
61 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.98E-03 |
62 | GO:0008237: metallopeptidase activity | 3.98E-03 |
63 | GO:0016831: carboxy-lyase activity | 4.23E-03 |
64 | GO:0008235: metalloexopeptidase activity | 4.23E-03 |
65 | GO:0004427: inorganic diphosphatase activity | 4.23E-03 |
66 | GO:0008865: fructokinase activity | 4.90E-03 |
67 | GO:0008236: serine-type peptidase activity | 5.55E-03 |
68 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.62E-03 |
69 | GO:0003843: 1,3-beta-D-glucan synthase activity | 5.62E-03 |
70 | GO:0004337: geranyltranstransferase activity | 6.37E-03 |
71 | GO:0030145: manganese ion binding | 6.75E-03 |
72 | GO:0008047: enzyme activator activity | 7.97E-03 |
73 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 8.82E-03 |
74 | GO:0004177: aminopeptidase activity | 8.82E-03 |
75 | GO:0004161: dimethylallyltranstransferase activity | 8.82E-03 |
76 | GO:0000049: tRNA binding | 9.70E-03 |
77 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.03E-02 |
78 | GO:0031072: heat shock protein binding | 1.06E-02 |
79 | GO:0005198: structural molecule activity | 1.07E-02 |
80 | GO:0045735: nutrient reservoir activity | 1.53E-02 |
81 | GO:0015079: potassium ion transmembrane transporter activity | 1.56E-02 |
82 | GO:0004176: ATP-dependent peptidase activity | 1.67E-02 |
83 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.78E-02 |
84 | GO:0003756: protein disulfide isomerase activity | 2.01E-02 |
85 | GO:0047134: protein-disulfide reductase activity | 2.13E-02 |
86 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.37E-02 |
87 | GO:0004791: thioredoxin-disulfide reductase activity | 2.50E-02 |
88 | GO:0016853: isomerase activity | 2.50E-02 |
89 | GO:0019901: protein kinase binding | 2.63E-02 |
90 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.76E-02 |
91 | GO:0048038: quinone binding | 2.76E-02 |
92 | GO:0000156: phosphorelay response regulator activity | 3.02E-02 |
93 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.02E-02 |
94 | GO:0008483: transaminase activity | 3.30E-02 |
95 | GO:0005200: structural constituent of cytoskeleton | 3.30E-02 |
96 | GO:0016597: amino acid binding | 3.44E-02 |
97 | GO:0005509: calcium ion binding | 3.58E-02 |
98 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.02E-02 |
99 | GO:0042802: identical protein binding | 4.04E-02 |
100 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 4.17E-02 |
101 | GO:0004601: peroxidase activity | 4.90E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
2 | GO:0009507: chloroplast | 2.40E-52 |
3 | GO:0009570: chloroplast stroma | 8.13E-37 |
4 | GO:0009941: chloroplast envelope | 1.34E-28 |
5 | GO:0009543: chloroplast thylakoid lumen | 2.41E-20 |
6 | GO:0009535: chloroplast thylakoid membrane | 3.58E-19 |
7 | GO:0009579: thylakoid | 3.13E-14 |
8 | GO:0031977: thylakoid lumen | 3.86E-13 |
9 | GO:0009654: photosystem II oxygen evolving complex | 7.86E-08 |
10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.74E-07 |
11 | GO:0009534: chloroplast thylakoid | 1.82E-07 |
12 | GO:0019898: extrinsic component of membrane | 1.92E-05 |
13 | GO:0048046: apoplast | 3.12E-05 |
14 | GO:0000311: plastid large ribosomal subunit | 3.70E-05 |
15 | GO:0030095: chloroplast photosystem II | 5.55E-05 |
16 | GO:0005840: ribosome | 9.78E-05 |
17 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 2.77E-04 |
18 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.77E-04 |
19 | GO:0010319: stromule | 4.66E-04 |
20 | GO:0009706: chloroplast inner membrane | 5.34E-04 |
21 | GO:0042170: plastid membrane | 6.09E-04 |
22 | GO:0031969: chloroplast membrane | 7.16E-04 |
23 | GO:0031012: extracellular matrix | 8.26E-04 |
24 | GO:0005875: microtubule associated complex | 1.15E-03 |
25 | GO:0005960: glycine cleavage complex | 1.41E-03 |
26 | GO:0022626: cytosolic ribosome | 3.59E-03 |
27 | GO:0009533: chloroplast stromal thylakoid | 4.23E-03 |
28 | GO:0000148: 1,3-beta-D-glucan synthase complex | 5.62E-03 |
29 | GO:0009539: photosystem II reaction center | 5.62E-03 |
30 | GO:0045298: tubulin complex | 6.37E-03 |
31 | GO:0009505: plant-type cell wall | 6.42E-03 |
32 | GO:0015934: large ribosomal subunit | 6.75E-03 |
33 | GO:0016324: apical plasma membrane | 7.97E-03 |
34 | GO:0046658: anchored component of plasma membrane | 9.14E-03 |
35 | GO:0005618: cell wall | 9.56E-03 |
36 | GO:0031307: integral component of mitochondrial outer membrane | 9.70E-03 |
37 | GO:0009508: plastid chromosome | 1.06E-02 |
38 | GO:0000312: plastid small ribosomal subunit | 1.16E-02 |
39 | GO:0005874: microtubule | 1.40E-02 |
40 | GO:0042651: thylakoid membrane | 1.56E-02 |
41 | GO:0022625: cytosolic large ribosomal subunit | 1.56E-02 |
42 | GO:0009532: plastid stroma | 1.67E-02 |
43 | GO:0009536: plastid | 1.88E-02 |
44 | GO:0005871: kinesin complex | 2.13E-02 |
45 | GO:0010287: plastoglobule | 2.19E-02 |
46 | GO:0009523: photosystem II | 2.63E-02 |
47 | GO:0031225: anchored component of membrane | 2.75E-02 |
48 | GO:0009295: nucleoid | 3.30E-02 |
49 | GO:0005778: peroxisomal membrane | 3.30E-02 |
50 | GO:0030529: intracellular ribonucleoprotein complex | 3.58E-02 |
51 | GO:0009707: chloroplast outer membrane | 4.33E-02 |