gene detail

Gene description

TAIR ID: AT3G46580

Short description: methyl-CPG-binding domain protein 5

Pathogen responsiveness: -1.53

General responsiveness: -3.34

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, transcription

GO cellular component

nuclear heterochromatin, perinucleolar chromocenter, nucleus

GO molecular function

protein self-association, protein binding, enzyme binding

Protein domain

Pfam	PF01429, Methyl-CpG binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G18770

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

Coexpression network

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.71	4.58E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.96	2.20E-11