GO Enrichment Analysis of Co-expressed Genes with
AT3G46580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 2 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 3 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 4 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 5 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 6 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 7 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 8 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 9 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 10 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 11 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 12 | GO:0040008: regulation of growth | 8.72E-07 |
| 13 | GO:0009733: response to auxin | 1.35E-06 |
| 14 | GO:0009734: auxin-activated signaling pathway | 2.18E-05 |
| 15 | GO:2000012: regulation of auxin polar transport | 1.03E-04 |
| 16 | GO:0009658: chloroplast organization | 2.80E-04 |
| 17 | GO:0042372: phylloquinone biosynthetic process | 2.85E-04 |
| 18 | GO:0048528: post-embryonic root development | 3.69E-04 |
| 19 | GO:0051418: microtubule nucleation by microtubule organizing center | 3.99E-04 |
| 20 | GO:0070509: calcium ion import | 3.99E-04 |
| 21 | GO:0042371: vitamin K biosynthetic process | 3.99E-04 |
| 22 | GO:0034080: CENP-A containing nucleosome assembly | 3.99E-04 |
| 23 | GO:0000066: mitochondrial ornithine transport | 3.99E-04 |
| 24 | GO:0006747: FAD biosynthetic process | 3.99E-04 |
| 25 | GO:0051171: regulation of nitrogen compound metabolic process | 3.99E-04 |
| 26 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 3.99E-04 |
| 27 | GO:0046620: regulation of organ growth | 4.62E-04 |
| 28 | GO:0009638: phototropism | 7.98E-04 |
| 29 | GO:1900033: negative regulation of trichome patterning | 8.66E-04 |
| 30 | GO:0033566: gamma-tubulin complex localization | 8.66E-04 |
| 31 | GO:0006415: translational termination | 1.07E-03 |
| 32 | GO:0006954: inflammatory response | 1.40E-03 |
| 33 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 1.40E-03 |
| 34 | GO:0010623: programmed cell death involved in cell development | 1.40E-03 |
| 35 | GO:0009150: purine ribonucleotide metabolic process | 1.40E-03 |
| 36 | GO:0001578: microtubule bundle formation | 1.40E-03 |
| 37 | GO:0071398: cellular response to fatty acid | 1.40E-03 |
| 38 | GO:0007052: mitotic spindle organization | 1.40E-03 |
| 39 | GO:0048281: inflorescence morphogenesis | 1.40E-03 |
| 40 | GO:0070588: calcium ion transmembrane transport | 1.75E-03 |
| 41 | GO:0090307: mitotic spindle assembly | 2.03E-03 |
| 42 | GO:0010306: rhamnogalacturonan II biosynthetic process | 2.03E-03 |
| 43 | GO:0010148: transpiration | 2.03E-03 |
| 44 | GO:0010255: glucose mediated signaling pathway | 2.03E-03 |
| 45 | GO:0032981: mitochondrial respiratory chain complex I assembly | 2.03E-03 |
| 46 | GO:2000904: regulation of starch metabolic process | 2.03E-03 |
| 47 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 2.03E-03 |
| 48 | GO:0034508: centromere complex assembly | 2.03E-03 |
| 49 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.03E-03 |
| 50 | GO:0007231: osmosensory signaling pathway | 2.03E-03 |
| 51 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 2.03E-03 |
| 52 | GO:0051639: actin filament network formation | 2.03E-03 |
| 53 | GO:0044211: CTP salvage | 2.03E-03 |
| 54 | GO:0005992: trehalose biosynthetic process | 2.16E-03 |
| 55 | GO:0033500: carbohydrate homeostasis | 2.73E-03 |
| 56 | GO:0010508: positive regulation of autophagy | 2.73E-03 |
| 57 | GO:0007020: microtubule nucleation | 2.73E-03 |
| 58 | GO:0044206: UMP salvage | 2.73E-03 |
| 59 | GO:0048629: trichome patterning | 2.73E-03 |
| 60 | GO:0051764: actin crosslink formation | 2.73E-03 |
| 61 | GO:0051322: anaphase | 2.73E-03 |
| 62 | GO:0022622: root system development | 2.73E-03 |
| 63 | GO:0007166: cell surface receptor signaling pathway | 3.42E-03 |
| 64 | GO:0046785: microtubule polymerization | 3.49E-03 |
| 65 | GO:0032543: mitochondrial translation | 3.49E-03 |
| 66 | GO:0010236: plastoquinone biosynthetic process | 3.49E-03 |
| 67 | GO:0010158: abaxial cell fate specification | 3.49E-03 |
| 68 | GO:0032876: negative regulation of DNA endoreduplication | 3.49E-03 |
| 69 | GO:0010087: phloem or xylem histogenesis | 3.99E-03 |
| 70 | GO:0009958: positive gravitropism | 4.30E-03 |
| 71 | GO:0016554: cytidine to uridine editing | 4.32E-03 |
| 72 | GO:0006655: phosphatidylglycerol biosynthetic process | 4.32E-03 |
| 73 | GO:0006206: pyrimidine nucleobase metabolic process | 4.32E-03 |
| 74 | GO:0032973: amino acid export | 4.32E-03 |
| 75 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 4.32E-03 |
| 76 | GO:0010405: arabinogalactan protein metabolic process | 4.32E-03 |
| 77 | GO:0030488: tRNA methylation | 5.20E-03 |
| 78 | GO:0080086: stamen filament development | 5.20E-03 |
| 79 | GO:0009648: photoperiodism | 5.20E-03 |
| 80 | GO:0009740: gibberellic acid mediated signaling pathway | 5.89E-03 |
| 81 | GO:0010050: vegetative phase change | 6.15E-03 |
| 82 | GO:0070370: cellular heat acclimation | 6.15E-03 |
| 83 | GO:0030307: positive regulation of cell growth | 6.15E-03 |
| 84 | GO:0010103: stomatal complex morphogenesis | 6.15E-03 |
| 85 | GO:0032880: regulation of protein localization | 6.15E-03 |
| 86 | GO:0009772: photosynthetic electron transport in photosystem II | 6.15E-03 |
| 87 | GO:0043090: amino acid import | 6.15E-03 |
| 88 | GO:0042255: ribosome assembly | 7.15E-03 |
| 89 | GO:0006353: DNA-templated transcription, termination | 7.15E-03 |
| 90 | GO:0009850: auxin metabolic process | 7.15E-03 |
| 91 | GO:0070413: trehalose metabolism in response to stress | 7.15E-03 |
| 92 | GO:0010078: maintenance of root meristem identity | 7.15E-03 |
| 93 | GO:0009704: de-etiolation | 7.15E-03 |
| 94 | GO:0032875: regulation of DNA endoreduplication | 7.15E-03 |
| 95 | GO:0009231: riboflavin biosynthetic process | 7.15E-03 |
| 96 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.94E-03 |
| 97 | GO:0006468: protein phosphorylation | 8.18E-03 |
| 98 | GO:0001558: regulation of cell growth | 8.21E-03 |
| 99 | GO:0009657: plastid organization | 8.21E-03 |
| 100 | GO:0032544: plastid translation | 8.21E-03 |
| 101 | GO:0043562: cellular response to nitrogen levels | 8.21E-03 |
| 102 | GO:0009827: plant-type cell wall modification | 8.21E-03 |
| 103 | GO:0009627: systemic acquired resistance | 8.60E-03 |
| 104 | GO:0080144: amino acid homeostasis | 9.31E-03 |
| 105 | GO:0000373: Group II intron splicing | 9.31E-03 |
| 106 | GO:0000902: cell morphogenesis | 9.31E-03 |
| 107 | GO:0009051: pentose-phosphate shunt, oxidative branch | 9.31E-03 |
| 108 | GO:1900865: chloroplast RNA modification | 1.05E-02 |
| 109 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.05E-02 |
| 110 | GO:0071577: zinc II ion transmembrane transport | 1.05E-02 |
| 111 | GO:0016310: phosphorylation | 1.12E-02 |
| 112 | GO:0048527: lateral root development | 1.17E-02 |
| 113 | GO:0009299: mRNA transcription | 1.17E-02 |
| 114 | GO:0006535: cysteine biosynthetic process from serine | 1.17E-02 |
| 115 | GO:0006949: syncytium formation | 1.17E-02 |
| 116 | GO:0007623: circadian rhythm | 1.28E-02 |
| 117 | GO:0045490: pectin catabolic process | 1.28E-02 |
| 118 | GO:0009773: photosynthetic electron transport in photosystem I | 1.29E-02 |
| 119 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.29E-02 |
| 120 | GO:0009684: indoleacetic acid biosynthetic process | 1.29E-02 |
| 121 | GO:0006816: calcium ion transport | 1.29E-02 |
| 122 | GO:0016042: lipid catabolic process | 1.30E-02 |
| 123 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.43E-02 |
| 124 | GO:0010582: floral meristem determinacy | 1.43E-02 |
| 125 | GO:0006790: sulfur compound metabolic process | 1.43E-02 |
| 126 | GO:0006839: mitochondrial transport | 1.46E-02 |
| 127 | GO:0009785: blue light signaling pathway | 1.56E-02 |
| 128 | GO:0010628: positive regulation of gene expression | 1.56E-02 |
| 129 | GO:0006006: glucose metabolic process | 1.56E-02 |
| 130 | GO:0009725: response to hormone | 1.56E-02 |
| 131 | GO:0010588: cotyledon vascular tissue pattern formation | 1.56E-02 |
| 132 | GO:0008283: cell proliferation | 1.65E-02 |
| 133 | GO:0009926: auxin polar transport | 1.65E-02 |
| 134 | GO:0048467: gynoecium development | 1.70E-02 |
| 135 | GO:0007275: multicellular organism development | 1.74E-02 |
| 136 | GO:0009965: leaf morphogenesis | 1.86E-02 |
| 137 | GO:0009833: plant-type primary cell wall biogenesis | 1.99E-02 |
| 138 | GO:0006833: water transport | 1.99E-02 |
| 139 | GO:0009664: plant-type cell wall organization | 2.08E-02 |
| 140 | GO:0009826: unidimensional cell growth | 2.12E-02 |
| 141 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.14E-02 |
| 142 | GO:0030150: protein import into mitochondrial matrix | 2.14E-02 |
| 143 | GO:0007010: cytoskeleton organization | 2.14E-02 |
| 144 | GO:0010187: negative regulation of seed germination | 2.14E-02 |
| 145 | GO:0051017: actin filament bundle assembly | 2.14E-02 |
| 146 | GO:0019344: cysteine biosynthetic process | 2.14E-02 |
| 147 | GO:0006418: tRNA aminoacylation for protein translation | 2.30E-02 |
| 148 | GO:0043622: cortical microtubule organization | 2.30E-02 |
| 149 | GO:0051302: regulation of cell division | 2.30E-02 |
| 150 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.31E-02 |
| 151 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.63E-02 |
| 152 | GO:0006730: one-carbon metabolic process | 2.63E-02 |
| 153 | GO:0031348: negative regulation of defense response | 2.63E-02 |
| 154 | GO:0009693: ethylene biosynthetic process | 2.79E-02 |
| 155 | GO:0009686: gibberellin biosynthetic process | 2.79E-02 |
| 156 | GO:0010082: regulation of root meristem growth | 2.79E-02 |
| 157 | GO:0001944: vasculature development | 2.79E-02 |
| 158 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.79E-02 |
| 159 | GO:0080167: response to karrikin | 2.91E-02 |
| 160 | GO:0010089: xylem development | 2.96E-02 |
| 161 | GO:0010214: seed coat development | 2.96E-02 |
| 162 | GO:0008284: positive regulation of cell proliferation | 3.14E-02 |
| 163 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.14E-02 |
| 164 | GO:0000226: microtubule cytoskeleton organization | 3.32E-02 |
| 165 | GO:0000271: polysaccharide biosynthetic process | 3.32E-02 |
| 166 | GO:0080022: primary root development | 3.32E-02 |
| 167 | GO:0008033: tRNA processing | 3.32E-02 |
| 168 | GO:0034220: ion transmembrane transport | 3.32E-02 |
| 169 | GO:0071555: cell wall organization | 3.34E-02 |
| 170 | GO:0009742: brassinosteroid mediated signaling pathway | 3.37E-02 |
| 171 | GO:0045489: pectin biosynthetic process | 3.50E-02 |
| 172 | GO:0048868: pollen tube development | 3.50E-02 |
| 173 | GO:0009741: response to brassinosteroid | 3.50E-02 |
| 174 | GO:0010268: brassinosteroid homeostasis | 3.50E-02 |
| 175 | GO:0048544: recognition of pollen | 3.69E-02 |
| 176 | GO:0030154: cell differentiation | 3.85E-02 |
| 177 | GO:0048825: cotyledon development | 3.87E-02 |
| 178 | GO:0008654: phospholipid biosynthetic process | 3.87E-02 |
| 179 | GO:0009851: auxin biosynthetic process | 3.87E-02 |
| 180 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.07E-02 |
| 181 | GO:0000302: response to reactive oxygen species | 4.07E-02 |
| 182 | GO:0016132: brassinosteroid biosynthetic process | 4.07E-02 |
| 183 | GO:0009058: biosynthetic process | 4.18E-02 |
| 184 | GO:0016032: viral process | 4.26E-02 |
| 185 | GO:0032502: developmental process | 4.26E-02 |
| 186 | GO:0009828: plant-type cell wall loosening | 4.66E-02 |
| 187 | GO:0016125: sterol metabolic process | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 2 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 3 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 4 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 5 | GO:0030570: pectate lyase activity | 3.35E-04 |
| 6 | GO:0016829: lyase activity | 3.78E-04 |
| 7 | GO:0005290: L-histidine transmembrane transporter activity | 3.99E-04 |
| 8 | GO:0051777: ent-kaurenoate oxidase activity | 3.99E-04 |
| 9 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.99E-04 |
| 10 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 3.99E-04 |
| 11 | GO:0050139: nicotinate-N-glucosyltransferase activity | 3.99E-04 |
| 12 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 3.99E-04 |
| 13 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 5.20E-04 |
| 14 | GO:0003747: translation release factor activity | 6.76E-04 |
| 15 | GO:0003919: FMN adenylyltransferase activity | 8.66E-04 |
| 16 | GO:0000064: L-ornithine transmembrane transporter activity | 8.66E-04 |
| 17 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 8.66E-04 |
| 18 | GO:0050017: L-3-cyanoalanine synthase activity | 8.66E-04 |
| 19 | GO:0043425: bHLH transcription factor binding | 8.66E-04 |
| 20 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 8.66E-04 |
| 21 | GO:0004805: trehalose-phosphatase activity | 9.28E-04 |
| 22 | GO:0005262: calcium channel activity | 1.38E-03 |
| 23 | GO:0002161: aminoacyl-tRNA editing activity | 1.40E-03 |
| 24 | GO:0004557: alpha-galactosidase activity | 1.40E-03 |
| 25 | GO:0052692: raffinose alpha-galactosidase activity | 1.40E-03 |
| 26 | GO:0070180: large ribosomal subunit rRNA binding | 1.40E-03 |
| 27 | GO:0070330: aromatase activity | 1.40E-03 |
| 28 | GO:0015181: arginine transmembrane transporter activity | 2.03E-03 |
| 29 | GO:0016149: translation release factor activity, codon specific | 2.03E-03 |
| 30 | GO:0017172: cysteine dioxygenase activity | 2.03E-03 |
| 31 | GO:0047627: adenylylsulfatase activity | 2.03E-03 |
| 32 | GO:0001872: (1->3)-beta-D-glucan binding | 2.03E-03 |
| 33 | GO:0015189: L-lysine transmembrane transporter activity | 2.03E-03 |
| 34 | GO:0031418: L-ascorbic acid binding | 2.16E-03 |
| 35 | GO:0019199: transmembrane receptor protein kinase activity | 2.73E-03 |
| 36 | GO:0042277: peptide binding | 2.73E-03 |
| 37 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.73E-03 |
| 38 | GO:0004659: prenyltransferase activity | 2.73E-03 |
| 39 | GO:0004845: uracil phosphoribosyltransferase activity | 2.73E-03 |
| 40 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.73E-03 |
| 41 | GO:0043015: gamma-tubulin binding | 2.73E-03 |
| 42 | GO:0003727: single-stranded RNA binding | 3.40E-03 |
| 43 | GO:0018685: alkane 1-monooxygenase activity | 3.49E-03 |
| 44 | GO:0016846: carbon-sulfur lyase activity | 3.49E-03 |
| 45 | GO:0016208: AMP binding | 4.32E-03 |
| 46 | GO:0042578: phosphoric ester hydrolase activity | 4.32E-03 |
| 47 | GO:0004605: phosphatidate cytidylyltransferase activity | 4.32E-03 |
| 48 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 4.32E-03 |
| 49 | GO:0004849: uridine kinase activity | 5.20E-03 |
| 50 | GO:0003730: mRNA 3'-UTR binding | 5.20E-03 |
| 51 | GO:0004656: procollagen-proline 4-dioxygenase activity | 5.20E-03 |
| 52 | GO:0004124: cysteine synthase activity | 5.20E-03 |
| 53 | GO:0008195: phosphatidate phosphatase activity | 5.20E-03 |
| 54 | GO:0016788: hydrolase activity, acting on ester bonds | 5.59E-03 |
| 55 | GO:0052689: carboxylic ester hydrolase activity | 8.77E-03 |
| 56 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 9.31E-03 |
| 57 | GO:0016301: kinase activity | 1.13E-02 |
| 58 | GO:0044212: transcription regulatory region DNA binding | 1.20E-02 |
| 59 | GO:0008017: microtubule binding | 1.35E-02 |
| 60 | GO:0015266: protein channel activity | 1.56E-02 |
| 61 | GO:0004089: carbonate dehydratase activity | 1.56E-02 |
| 62 | GO:0031072: heat shock protein binding | 1.56E-02 |
| 63 | GO:0004185: serine-type carboxypeptidase activity | 1.65E-02 |
| 64 | GO:0008083: growth factor activity | 1.70E-02 |
| 65 | GO:0003714: transcription corepressor activity | 2.14E-02 |
| 66 | GO:0005385: zinc ion transmembrane transporter activity | 2.14E-02 |
| 67 | GO:0008324: cation transmembrane transporter activity | 2.30E-02 |
| 68 | GO:0004176: ATP-dependent peptidase activity | 2.46E-02 |
| 69 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 2.63E-02 |
| 70 | GO:0016760: cellulose synthase (UDP-forming) activity | 2.79E-02 |
| 71 | GO:0004650: polygalacturonase activity | 2.90E-02 |
| 72 | GO:0004812: aminoacyl-tRNA ligase activity | 3.14E-02 |
| 73 | GO:0008536: Ran GTPase binding | 3.50E-02 |
| 74 | GO:0001085: RNA polymerase II transcription factor binding | 3.50E-02 |
| 75 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 3.64E-02 |
| 76 | GO:0016758: transferase activity, transferring hexosyl groups | 3.87E-02 |
| 77 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.15E-02 |
| 78 | GO:0000156: phosphorelay response regulator activity | 4.46E-02 |
| 79 | GO:0051015: actin filament binding | 4.46E-02 |
| 80 | GO:0016791: phosphatase activity | 4.66E-02 |
| 81 | GO:0016759: cellulose synthase activity | 4.66E-02 |