gene detail

Gene description

TAIR ID: AT3G46550

Short description: Fasciclin-like arabinogalactan family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice:

OS05G0459700

Maize:

GRMZM2G421415

Wheat:

TA.4050.1.S1_AT

GO biological process

mucilage biosynthetic process involved in seed coat development, mucilage biosynthetic process, abscisic acid-activated signaling pathway, cell adhesion, response to salt stress, multidimensional cell growth

GO cellular component

plasma membrane, anchored component of plasma membrane, anchored component of membrane, external side of plasma membrane

GO molecular function

unkown

Protein domain

Pfam	PF02469, Fasciclin domain
SMART	SM00554, FAS1

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230, AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.34	8.60E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.12	5.17E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.95	1.56E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.29	1.14E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.50	7.79E-08