Gene: AT3G27960
     

Gene description


TAIR ID: AT3G27960

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -0.96

General responsiveness: -0.74

Orthologous


Rice:

OS02G0708400  

Maize:

GRMZM2G060947  

Wheat: No orthologous gene

GO biological process


pollen tube growth, regulation of defense response


GO cellular component


plasma membrane


GO molecular function


unkown


Protein domain


PfamPF13374, Tetratricopeptide repeat
PfamPF13424, Tetratricopeptide repeat
SMARTSM00028, TPR

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 74 (Top5%)

click to view PPI network

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.172.09E-06
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.372.23E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.662.06E-08
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.511.38E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.103.42E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.213.63E-03






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