gene detail

Gene description

TAIR ID: AT3G27925

Short description: DegP protease 1

Pathogen responsiveness: -1.54

General responsiveness: 1.61

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

protein catabolic process, response to cytokinin, proteolysis, photosystem II repair

GO cellular component

chloroplast thylakoid membrane, chloroplast thylakoid lumen, nucleus, thylakoid, chloroplast thylakoid, chloroplast, thylakoid lumen, mitochondrion

GO molecular function

serine-type endopeptidase activity, protein binding, serine-type peptidase activity, identical protein binding

Protein domain

Pfam	PF13365, Trypsin-like peptidase domain
Pfam	PF13180, PDZ domain
SMART	SM00228, PDZ

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 14 (Top20%)

Coexpression network

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.69	1.73E-03