Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G27925

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1902171: regulation of tocopherol cyclase activity0.00E+00
2GO:1902553: positive regulation of catalase activity0.00E+00
3GO:0018002: N-terminal peptidyl-glutamic acid acetylation1.57E-05
4GO:0006475: internal protein amino acid acetylation1.57E-05
5GO:0006474: N-terminal protein amino acid acetylation1.57E-05
6GO:0017198: N-terminal peptidyl-serine acetylation1.57E-05
7GO:0000256: allantoin catabolic process4.12E-05
8GO:0009915: phloem sucrose loading4.12E-05
9GO:0042548: regulation of photosynthesis, light reaction4.12E-05
10GO:0010136: ureide catabolic process7.34E-05
11GO:0090308: regulation of methylation-dependent chromatin silencing1.11E-04
12GO:0006145: purine nucleobase catabolic process1.11E-04
13GO:0016123: xanthophyll biosynthetic process1.98E-04
14GO:0000060: protein import into nucleus, translocation2.47E-04
15GO:0009643: photosynthetic acclimation2.47E-04
16GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.47E-04
17GO:0010077: maintenance of inflorescence meristem identity2.97E-04
18GO:0050821: protein stabilization4.04E-04
19GO:0010206: photosystem II repair5.18E-04
20GO:0009688: abscisic acid biosynthetic process6.38E-04
21GO:0019684: photosynthesis, light reaction7.00E-04
22GO:0010216: maintenance of DNA methylation7.00E-04
23GO:0015770: sucrose transport7.00E-04
24GO:0005985: sucrose metabolic process9.64E-04
25GO:0006970: response to osmotic stress1.21E-03
26GO:0016117: carotenoid biosynthetic process1.56E-03
27GO:0006606: protein import into nucleus1.65E-03
28GO:0010182: sugar mediated signaling pathway1.73E-03
29GO:0009911: positive regulation of flower development2.55E-03
30GO:0009734: auxin-activated signaling pathway2.84E-03
31GO:0006950: response to stress2.84E-03
32GO:0015995: chlorophyll biosynthetic process2.84E-03
33GO:0016311: dephosphorylation2.94E-03
34GO:0010311: lateral root formation3.15E-03
35GO:0048527: lateral root development3.36E-03
36GO:0007568: aging3.36E-03
37GO:0010114: response to red light4.25E-03
38GO:0000165: MAPK cascade4.84E-03
39GO:0009624: response to nematode6.64E-03
40GO:0009733: response to auxin8.07E-03
41GO:0040008: regulation of growth9.41E-03
42GO:0007623: circadian rhythm9.73E-03
43GO:0009739: response to gibberellin1.05E-02
44GO:0006810: transport1.06E-02
45GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.25E-02
46GO:0006468: protein phosphorylation1.27E-02
47GO:0009723: response to ethylene1.47E-02
48GO:0048366: leaf development1.49E-02
49GO:0044550: secondary metabolite biosynthetic process1.63E-02
50GO:0015979: photosynthesis1.69E-02
51GO:0009408: response to heat2.03E-02
52GO:0016567: protein ubiquitination2.20E-02
53GO:0009908: flower development2.85E-02
54GO:0035556: intracellular signal transduction3.18E-02
55GO:0045893: positive regulation of transcription, DNA-templated3.38E-02
56GO:0009414: response to water deprivation4.97E-02
RankGO TermAdjusted P value
1GO:0008685: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity0.00E+00
2GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
3GO:1990189: peptide-serine-N-acetyltransferase activity1.57E-05
4GO:1990190: peptide-glutamate-N-acetyltransferase activity1.57E-05
5GO:0004848: ureidoglycolate hydrolase activity7.34E-05
6GO:0003993: acid phosphatase activity1.86E-04
7GO:0008506: sucrose:proton symporter activity3.49E-04
8GO:0071949: FAD binding5.18E-04
9GO:0008515: sucrose transmembrane transporter activity7.00E-04
10GO:0008134: transcription factor binding1.10E-03
11GO:0004672: protein kinase activity1.55E-03
12GO:0008080: N-acetyltransferase activity1.73E-03
13GO:0008237: metallopeptidase activity2.36E-03
14GO:0016746: transferase activity, transferring acyl groups6.78E-03
15GO:0016829: lyase activity8.21E-03
16GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding8.50E-03
17GO:0015144: carbohydrate transmembrane transporter activity8.80E-03
18GO:0008565: protein transporter activity8.80E-03
19GO:0005351: sugar:proton symporter activity9.57E-03
20GO:0046983: protein dimerization activity9.60E-03
21GO:0061630: ubiquitin protein ligase activity1.60E-02
22GO:0016887: ATPase activity2.78E-02
23GO:0005524: ATP binding3.33E-02
24GO:0016301: kinase activity3.37E-02
25GO:0004674: protein serine/threonine kinase activity3.56E-02
RankGO TermAdjusted P value
1GO:0031415: NatA complex4.12E-05
2GO:0009535: chloroplast thylakoid membrane4.51E-05
3GO:0009538: photosystem I reaction center4.04E-04
4GO:0005720: nuclear heterochromatin5.18E-04
5GO:0010287: plastoglobule5.23E-04
6GO:0009507: chloroplast5.31E-04
7GO:0042651: thylakoid membrane1.18E-03
8GO:0031969: chloroplast membrane1.39E-03
9GO:0031977: thylakoid lumen4.02E-03
10GO:0009579: thylakoid4.26E-03
11GO:0009534: chloroplast thylakoid4.30E-03
12GO:0009543: chloroplast thylakoid lumen7.77E-03
13GO:0009570: chloroplast stroma1.03E-02
14GO:0005887: integral component of plasma membrane2.53E-02
15GO:0022626: cytosolic ribosome2.96E-02
16GO:0009941: chloroplast envelope3.39E-02
17GO:0005622: intracellular4.61E-02
Gene type



Gene DE type