GO Enrichment Analysis of Co-expressed Genes with
AT3G27925
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 2 | GO:0008618: 7-methylguanosine metabolic process | 0.00E+00 |
| 3 | GO:0010157: response to chlorate | 0.00E+00 |
| 4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 5 | GO:0036265: RNA (guanine-N7)-methylation | 0.00E+00 |
| 6 | GO:0009082: branched-chain amino acid biosynthetic process | 1.27E-05 |
| 7 | GO:0009099: valine biosynthetic process | 1.27E-05 |
| 8 | GO:0006400: tRNA modification | 1.74E-05 |
| 9 | GO:0009097: isoleucine biosynthetic process | 2.97E-05 |
| 10 | GO:0043266: regulation of potassium ion transport | 5.64E-05 |
| 11 | GO:2000021: regulation of ion homeostasis | 5.64E-05 |
| 12 | GO:0006177: GMP biosynthetic process | 5.64E-05 |
| 13 | GO:0045037: protein import into chloroplast stroma | 7.64E-05 |
| 14 | GO:0030036: actin cytoskeleton organization | 8.84E-05 |
| 15 | GO:0080005: photosystem stoichiometry adjustment | 1.37E-04 |
| 16 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 1.37E-04 |
| 17 | GO:0031648: protein destabilization | 1.37E-04 |
| 18 | GO:0042550: photosystem I stabilization | 1.37E-04 |
| 19 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.99E-04 |
| 20 | GO:2001295: malonyl-CoA biosynthetic process | 2.34E-04 |
| 21 | GO:0051127: positive regulation of actin nucleation | 2.34E-04 |
| 22 | GO:0019419: sulfate reduction | 2.34E-04 |
| 23 | GO:2001141: regulation of RNA biosynthetic process | 3.41E-04 |
| 24 | GO:0010107: potassium ion import | 4.56E-04 |
| 25 | GO:0015846: polyamine transport | 4.56E-04 |
| 26 | GO:0098719: sodium ion import across plasma membrane | 5.78E-04 |
| 27 | GO:0016123: xanthophyll biosynthetic process | 5.78E-04 |
| 28 | GO:0009635: response to herbicide | 7.07E-04 |
| 29 | GO:0010405: arabinogalactan protein metabolic process | 7.07E-04 |
| 30 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 7.07E-04 |
| 31 | GO:0042372: phylloquinone biosynthetic process | 8.44E-04 |
| 32 | GO:0030488: tRNA methylation | 8.44E-04 |
| 33 | GO:0019375: galactolipid biosynthetic process | 1.13E-03 |
| 34 | GO:0009704: de-etiolation | 1.13E-03 |
| 35 | GO:0055075: potassium ion homeostasis | 1.13E-03 |
| 36 | GO:0006002: fructose 6-phosphate metabolic process | 1.29E-03 |
| 37 | GO:0071482: cellular response to light stimulus | 1.29E-03 |
| 38 | GO:0051865: protein autoubiquitination | 1.45E-03 |
| 39 | GO:0010206: photosystem II repair | 1.45E-03 |
| 40 | GO:0090333: regulation of stomatal closure | 1.45E-03 |
| 41 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.62E-03 |
| 42 | GO:0051453: regulation of intracellular pH | 1.62E-03 |
| 43 | GO:0009098: leucine biosynthetic process | 1.62E-03 |
| 44 | GO:0006096: glycolytic process | 1.73E-03 |
| 45 | GO:0055062: phosphate ion homeostasis | 1.79E-03 |
| 46 | GO:0000103: sulfate assimilation | 1.79E-03 |
| 47 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.97E-03 |
| 48 | GO:0006352: DNA-templated transcription, initiation | 1.97E-03 |
| 49 | GO:0050826: response to freezing | 2.36E-03 |
| 50 | GO:0010030: positive regulation of seed germination | 2.76E-03 |
| 51 | GO:0010025: wax biosynthetic process | 2.97E-03 |
| 52 | GO:0080147: root hair cell development | 3.18E-03 |
| 53 | GO:0019344: cysteine biosynthetic process | 3.18E-03 |
| 54 | GO:0031408: oxylipin biosynthetic process | 3.63E-03 |
| 55 | GO:0080092: regulation of pollen tube growth | 3.86E-03 |
| 56 | GO:0016117: carotenoid biosynthetic process | 4.58E-03 |
| 57 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 4.58E-03 |
| 58 | GO:0042631: cellular response to water deprivation | 4.83E-03 |
| 59 | GO:0006885: regulation of pH | 5.09E-03 |
| 60 | GO:0006814: sodium ion transport | 5.35E-03 |
| 61 | GO:0009658: chloroplast organization | 5.47E-03 |
| 62 | GO:0010583: response to cyclopentenone | 6.15E-03 |
| 63 | GO:0030163: protein catabolic process | 6.43E-03 |
| 64 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.01E-03 |
| 65 | GO:0016126: sterol biosynthetic process | 7.59E-03 |
| 66 | GO:0010411: xyloglucan metabolic process | 8.50E-03 |
| 67 | GO:0030244: cellulose biosynthetic process | 9.13E-03 |
| 68 | GO:0009867: jasmonic acid mediated signaling pathway | 1.08E-02 |
| 69 | GO:0009637: response to blue light | 1.08E-02 |
| 70 | GO:0010114: response to red light | 1.29E-02 |
| 71 | GO:0042546: cell wall biogenesis | 1.33E-02 |
| 72 | GO:0031347: regulation of defense response | 1.48E-02 |
| 73 | GO:0009664: plant-type cell wall organization | 1.51E-02 |
| 74 | GO:0042538: hyperosmotic salinity response | 1.51E-02 |
| 75 | GO:0055114: oxidation-reduction process | 1.59E-02 |
| 76 | GO:0009809: lignin biosynthetic process | 1.59E-02 |
| 77 | GO:0009793: embryo development ending in seed dormancy | 2.16E-02 |
| 78 | GO:0006633: fatty acid biosynthetic process | 2.82E-02 |
| 79 | GO:0045490: pectin catabolic process | 3.02E-02 |
| 80 | GO:0006470: protein dephosphorylation | 3.32E-02 |
| 81 | GO:0010468: regulation of gene expression | 3.42E-02 |
| 82 | GO:0071555: cell wall organization | 3.61E-02 |
| 83 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 3.90E-02 |
| 84 | GO:0009826: unidimensional cell growth | 4.01E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019808: polyamine binding | 0.00E+00 |
| 2 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 3 | GO:0008176: tRNA (guanine-N7-)-methyltransferase activity | 0.00E+00 |
| 4 | GO:0003984: acetolactate synthase activity | 5.64E-05 |
| 5 | GO:0046481: digalactosyldiacylglycerol synthase activity | 5.64E-05 |
| 6 | GO:0046480: galactolipid galactosyltransferase activity | 5.64E-05 |
| 7 | GO:0009973: adenylyl-sulfate reductase activity | 1.37E-04 |
| 8 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 1.37E-04 |
| 9 | GO:0010291: carotene beta-ring hydroxylase activity | 1.37E-04 |
| 10 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 1.37E-04 |
| 11 | GO:0003938: IMP dehydrogenase activity | 1.37E-04 |
| 12 | GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.37E-04 |
| 13 | GO:0035250: UDP-galactosyltransferase activity | 3.41E-04 |
| 14 | GO:0052656: L-isoleucine transaminase activity | 3.41E-04 |
| 15 | GO:0052654: L-leucine transaminase activity | 3.41E-04 |
| 16 | GO:0052655: L-valine transaminase activity | 3.41E-04 |
| 17 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.41E-04 |
| 18 | GO:0000254: C-4 methylsterol oxidase activity | 3.41E-04 |
| 19 | GO:0001053: plastid sigma factor activity | 4.56E-04 |
| 20 | GO:0004737: pyruvate decarboxylase activity | 4.56E-04 |
| 21 | GO:0016987: sigma factor activity | 4.56E-04 |
| 22 | GO:0004084: branched-chain-amino-acid transaminase activity | 4.56E-04 |
| 23 | GO:0003989: acetyl-CoA carboxylase activity | 5.78E-04 |
| 24 | GO:0016208: AMP binding | 7.07E-04 |
| 25 | GO:0015081: sodium ion transmembrane transporter activity | 7.07E-04 |
| 26 | GO:0030976: thiamine pyrophosphate binding | 7.07E-04 |
| 27 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 7.07E-04 |
| 28 | GO:0016832: aldehyde-lyase activity | 8.44E-04 |
| 29 | GO:0003872: 6-phosphofructokinase activity | 9.85E-04 |
| 30 | GO:0043022: ribosome binding | 1.13E-03 |
| 31 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.97E-03 |
| 32 | GO:0015386: potassium:proton antiporter activity | 1.97E-03 |
| 33 | GO:0003714: transcription corepressor activity | 3.18E-03 |
| 34 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 3.63E-03 |
| 35 | GO:0030570: pectate lyase activity | 4.10E-03 |
| 36 | GO:0008536: Ran GTPase binding | 5.09E-03 |
| 37 | GO:0010181: FMN binding | 5.35E-03 |
| 38 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.88E-03 |
| 39 | GO:0050660: flavin adenine dinucleotide binding | 6.32E-03 |
| 40 | GO:0015385: sodium:proton antiporter activity | 6.43E-03 |
| 41 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.43E-03 |
| 42 | GO:0005200: structural constituent of cytoskeleton | 7.00E-03 |
| 43 | GO:0005506: iron ion binding | 7.30E-03 |
| 44 | GO:0004721: phosphoprotein phosphatase activity | 8.50E-03 |
| 45 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 8.50E-03 |
| 46 | GO:0008236: serine-type peptidase activity | 8.81E-03 |
| 47 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.01E-02 |
| 48 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.18E-02 |
| 49 | GO:0043621: protein self-association | 1.36E-02 |
| 50 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.59E-02 |
| 51 | GO:0016298: lipase activity | 1.63E-02 |
| 52 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.83E-02 |
| 53 | GO:0003779: actin binding | 2.00E-02 |
| 54 | GO:0051082: unfolded protein binding | 2.04E-02 |
| 55 | GO:0016740: transferase activity | 2.18E-02 |
| 56 | GO:0016758: transferase activity, transferring hexosyl groups | 2.35E-02 |
| 57 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.45E-02 |
| 58 | GO:0019825: oxygen binding | 2.54E-02 |
| 59 | GO:0016829: lyase activity | 2.54E-02 |
| 60 | GO:0004252: serine-type endopeptidase activity | 2.58E-02 |
| 61 | GO:0005524: ATP binding | 2.60E-02 |
| 62 | GO:0008565: protein transporter activity | 2.73E-02 |
| 63 | GO:0005525: GTP binding | 2.93E-02 |
| 64 | GO:0016757: transferase activity, transferring glycosyl groups | 3.49E-02 |
| 65 | GO:0003824: catalytic activity | 3.95E-02 |
| 66 | GO:0000287: magnesium ion binding | 4.06E-02 |
| 67 | GO:0003682: chromatin binding | 4.29E-02 |
| 68 | GO:0016491: oxidoreductase activity | 4.73E-02 |