Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G27925

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071902: positive regulation of protein serine/threonine kinase activity5.43E-06
2GO:0006723: cuticle hydrocarbon biosynthetic process5.43E-06
3GO:0090421: embryonic meristem initiation5.43E-06
4GO:0034728: nucleosome organization5.43E-06
5GO:1900036: positive regulation of cellular response to heat5.43E-06
6GO:0016584: nucleosome positioning1.49E-05
7GO:0071217: cellular response to external biotic stimulus1.49E-05
8GO:0046898: response to cycloheximide1.49E-05
9GO:1900459: positive regulation of brassinosteroid mediated signaling pathway1.49E-05
10GO:0010506: regulation of autophagy2.75E-05
11GO:0071230: cellular response to amino acid stimulus2.75E-05
12GO:0031929: TOR signaling2.75E-05
13GO:0043044: ATP-dependent chromatin remodeling2.75E-05
14GO:0045836: positive regulation of meiotic nuclear division2.75E-05
15GO:0010272: response to silver ion2.75E-05
16GO:0043447: alkane biosynthetic process2.75E-05
17GO:0016049: cell growth2.99E-05
18GO:0045927: positive regulation of growth7.90E-05
19GO:0009267: cellular response to starvation9.99E-05
20GO:0030307: positive regulation of cell growth1.46E-04
21GO:0009880: embryonic pattern specification1.96E-04
22GO:0001708: cell fate specification2.22E-04
23GO:0008361: regulation of cell size3.35E-04
24GO:0048467: gynoecium development3.96E-04
25GO:0051321: meiotic cell cycle5.55E-04
26GO:0006366: transcription from RNA polymerase II promoter5.55E-04
27GO:0009561: megagametogenesis6.58E-04
28GO:0048510: regulation of timing of transition from vegetative to reproductive phase8.75E-04
29GO:0006914: autophagy9.89E-04
30GO:0001666: response to hypoxia1.11E-03
31GO:0006974: cellular response to DNA damage stimulus1.19E-03
32GO:0048481: plant ovule development1.31E-03
33GO:0010114: response to red light1.81E-03
34GO:0009909: regulation of flower development2.37E-03
35GO:0048316: seed development2.53E-03
36GO:0009620: response to fungus2.64E-03
37GO:0016569: covalent chromatin modification2.70E-03
38GO:0009553: embryo sac development2.75E-03
39GO:0009624: response to nematode2.80E-03
40GO:0009742: brassinosteroid mediated signaling pathway2.92E-03
41GO:0009790: embryo development3.63E-03
42GO:0010228: vegetative to reproductive phase transition of meristem4.19E-03
43GO:0006470: protein dephosphorylation4.45E-03
44GO:0007166: cell surface receptor signaling pathway4.45E-03
45GO:0009617: response to bacterium4.58E-03
46GO:0009793: embryo development ending in seed dormancy4.60E-03
47GO:0006629: lipid metabolic process8.33E-03
48GO:0009908: flower development1.16E-02
49GO:0006979: response to oxidative stress2.07E-02
50GO:0030154: cell differentiation2.19E-02
51GO:0009733: response to auxin2.24E-02
52GO:0015031: protein transport2.44E-02
53GO:0007275: multicellular organism development3.34E-02
54GO:0016567: protein ubiquitination4.56E-02
RankGO TermAdjusted P value
1GO:0060090: binding, bridging0.00E+00
2GO:0031491: nucleosome binding1.22E-04
3GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1.22E-04
4GO:0030674: protein binding, bridging1.70E-04
5GO:0008138: protein tyrosine/serine/threonine phosphatase activity2.22E-04
6GO:0001055: RNA polymerase II activity2.49E-04
7GO:0005515: protein binding2.53E-04
8GO:0046982: protein heterodimerization activity3.23E-04
9GO:0003712: transcription cofactor activity4.26E-04
10GO:0004725: protein tyrosine phosphatase activity4.58E-04
11GO:0008094: DNA-dependent ATPase activity5.55E-04
12GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.21E-03
13GO:0004386: helicase activity2.97E-03
14GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.87E-03
15GO:0042803: protein homodimerization activity7.44E-03
16GO:0003677: DNA binding8.47E-03
17GO:0016887: ATPase activity1.13E-02
18GO:0000166: nucleotide binding1.25E-02
19GO:0003723: RNA binding1.55E-02
20GO:0004842: ubiquitin-protein transferase activity2.59E-02
21GO:0003729: mRNA binding2.73E-02
RankGO TermAdjusted P value
1GO:1990316: ATG1/ULK1 kinase complex5.43E-06
2GO:0031931: TORC1 complex2.75E-05
3GO:0005776: autophagosome5.99E-05
4GO:0031463: Cul3-RING ubiquitin ligase complex9.99E-05
5GO:0005665: DNA-directed RNA polymerase II, core complex3.35E-04
6GO:0031410: cytoplasmic vesicle5.89E-04
7GO:0005654: nucleoplasm3.21E-03
8GO:0080008: Cul4-RING E3 ubiquitin ligase complex5.84E-03
9GO:0005634: nucleus2.04E-02
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Gene type



Gene DE type