Gene: AT3G23700
     

Gene description


TAIR ID: AT3G23700

Short description: Nucleic acid-binding proteins superfamily

Pathogen responsiveness: 0.52

General responsiveness: 2.43

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G016084  

Wheat: No orthologous gene

GO biological process


response to abscisic acid, maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), DNA duplex unwinding, maturation of 5S rRNA, maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, response to cold, RNA folding


GO cellular component


chloroplast, chloroplast stroma, small-subunit processome, nucleolus, nucleus


GO molecular function


unkown


Protein domain


PfamPF00575, S1 RNA binding domain
SMARTSM00316, S1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G11260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


32 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.681.55E-02
GSE17464Laer, controlLaer, Flg22 2 h-1.551.52E-02
GSE17464Penta, controlPenta, Flg22 2 h-2.011.66E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.851.30E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.221.57E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.222.61E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.211.01E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.064.50E-08
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.071.26E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.832.22E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.014.10E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.812.71E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.004.11E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.381.99E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.171.52E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.681.92E-08
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.519.72E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.031.59E-11
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.492.57E-16
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.795.24E-09
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.962.29E-11
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.871.19E-10
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.932.38E-11
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.609.15E-08
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.853.10E-10
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.758.92E-09
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.853.67E-10
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.562.45E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.211.67E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.184.08E-08
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.216.77E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.941.81E-03






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