Gene: AT3G20820
     

Gene description


TAIR ID: AT3G20820

Short description: Leucine-rich repeat (LRR) family protein

Pathogen responsiveness: 1.63

General responsiveness: 1.79

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


signal transduction, defense response


GO cellular component


chloroplast, apoplast, plasma membrane, membrane, plasmodesma, cell wall


GO molecular function


unkown


Protein domain


PfamPF13855, Leucine rich repeat
PfamPF08263, Leucine rich repeat N-terminal domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G09290, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


67 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.943.92E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h-2.061.67E-06
GSE13739Col, WT, control 0 hCol, WT, G.orontii 5 d-1.547.66E-05
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-2.525.35E-10
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d-2.558.71E-10
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-2.766.67E-03
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-3.546.41E-04
GSE17464Laer, controlLaer, Flg22 1 h-2.594.61E-03
GSE17464Laer, controlLaer, Flg22 2 h-3.273.58E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.752.61E-03
GSE17464Penta, controlPenta, Flg22 2 h-3.716.54E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.148.52E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.904.37E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.264.91E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-5.571.71E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.884.67E-07
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h-1.767.73E-04
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h-1.542.47E-03
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.423.86E-04
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-1.771.20E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.391.92E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.231.32E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.337.16E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.329.69E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-4.615.11E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-3.975.81E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.151.45E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.865.71E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-4.112.62E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.661.28E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-3.262.01E-13
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.611.41E-02
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.551.52E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.388.35E-05
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-2.014.86E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.952.88E-02
GSE5520Col, WT, control 7 hCol, WT, E.coli_TUV86 flic- 7 h-1.992.95E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-4.743.07E-08
GSE5520Col, WT, control 7 hCol, WT, hrpA- 10 h-2.191.86E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.477.37E-11
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.957.49E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.801.45E-12
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.232.01E-08
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.922.87E-13
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-1.848.85E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-3.454.46E-17
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-2.283.78E-08
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.902.67E-06
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-2.049.39E-07
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h-1.502.99E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-2.014.49E-07
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h-1.875.36E-06
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.071.93E-07
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.682.80E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.388.10E-10
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.385.00E-09
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.274.98E-09
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.053.07E-07
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h-1.536.54E-04
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.602.42E-04
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h-1.666.94E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-4.006.58E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h-1.941.53E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.231.56E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-1.658.22E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.331.60E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.034.27E-03






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