Gene: AT3G18090
     

Gene description


TAIR ID: AT3G18090

Short description: nuclear RNA polymerase D2B

Pathogen responsiveness: NA

General responsiveness: -3.02

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, regulation of transcription


GO cellular component


membrane, nucleus, DNA-directed RNA polymerase I complex, integral component of membrane


GO molecular function


DNA binding, DNA-directed 5'-3' RNA polymerase activity, metal ion binding, ribonucleoside binding, RNA polymerase I activity


Protein domain


PfamPF04567, RNA polymerase Rpb2, domain 5
PfamPF04560, RNA polymerase Rpb2, domain 7
PfamPF04566, RNA polymerase Rpb2, domain 4
PfamPF04561, RNA polymerase Rpb2, domain 2
PfamPF04563, RNA polymerase beta subunit
PfamPF04565, RNA polymerase Rpb2, domain 3
PfamPF00562, RNA polymerase Rpb2, domain 6

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.636.97E-12






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.