co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G12040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033198: response to ATP	0.00E+00
2	GO:0051180: vitamin transport	6.26E-05
3	GO:0030974: thiamine pyrophosphate transport	6.26E-05
4	GO:0010365: positive regulation of ethylene biosynthetic process	6.26E-05
5	GO:0005976: polysaccharide metabolic process	1.52E-04
6	GO:0010541: acropetal auxin transport	1.52E-04
7	GO:0046939: nucleotide phosphorylation	1.52E-04
8	GO:0080185: effector dependent induction by symbiont of host immune response	1.52E-04
9	GO:0031349: positive regulation of defense response	1.52E-04
10	GO:0015893: drug transport	1.52E-04
11	GO:0051176: positive regulation of sulfur metabolic process	2.57E-04
12	GO:0000187: activation of MAPK activity	3.73E-04
13	GO:1902358: sulfate transmembrane transport	3.73E-04
14	GO:0009164: nucleoside catabolic process	6.32E-04
15	GO:0034314: Arp2/3 complex-mediated actin nucleation	7.73E-04
16	GO:0045491: xylan metabolic process	7.73E-04
17	GO:0009817: defense response to fungus, incompatible interaction	7.90E-04
18	GO:2000037: regulation of stomatal complex patterning	9.20E-04
19	GO:0006865: amino acid transport	9.47E-04
20	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.24E-03
21	GO:0030162: regulation of proteolysis	1.24E-03
22	GO:0009808: lignin metabolic process	1.41E-03
23	GO:0009060: aerobic respiration	1.58E-03
24	GO:0009056: catabolic process	1.58E-03
25	GO:0000902: cell morphogenesis	1.58E-03
26	GO:0048268: clathrin coat assembly	1.77E-03
27	GO:0016925: protein sumoylation	2.37E-03
28	GO:0010229: inflorescence development	2.58E-03
29	GO:0007015: actin filament organization	2.80E-03
30	GO:0010053: root epidermal cell differentiation	3.03E-03
31	GO:0009825: multidimensional cell growth	3.03E-03
32	GO:0003333: amino acid transmembrane transport	3.98E-03
33	GO:0009814: defense response, incompatible interaction	4.24E-03
34	GO:0016226: iron-sulfur cluster assembly	4.24E-03
35	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.24E-03
36	GO:0010227: floral organ abscission	4.50E-03
37	GO:0045492: xylan biosynthetic process	4.76E-03
38	GO:0006952: defense response	7.03E-03
39	GO:0010090: trichome morphogenesis	7.07E-03
40	GO:0006904: vesicle docking involved in exocytosis	7.70E-03
41	GO:0051607: defense response to virus	8.02E-03
42	GO:0009816: defense response to bacterium, incompatible interaction	8.68E-03
43	GO:0009627: systemic acquired resistance	9.01E-03
44	GO:0048527: lateral root development	1.11E-02
45	GO:0009867: jasmonic acid mediated signaling pathway	1.19E-02
46	GO:0006468: protein phosphorylation	1.25E-02
47	GO:0006839: mitochondrial transport	1.30E-02
48	GO:0006887: exocytosis	1.34E-02
49	GO:0006897: endocytosis	1.34E-02
50	GO:0051707: response to other organism	1.42E-02
51	GO:0000165: MAPK cascade	1.63E-02
52	GO:0031347: regulation of defense response	1.63E-02
53	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.63E-02
54	GO:0048367: shoot system development	2.02E-02
55	GO:0009626: plant-type hypersensitive response	2.07E-02
56	GO:0018105: peptidyl-serine phosphorylation	2.30E-02
57	GO:0009845: seed germination	2.80E-02
58	GO:0007623: circadian rhythm	3.33E-02
59	GO:0050832: defense response to fungus	3.50E-02
60	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.60E-02
61	GO:0042742: defense response to bacterium	4.13E-02

Rank	GO Term	Adjusted P value
1	GO:0010290: chlorophyll catabolite transmembrane transporter activity	0.00E+00
2	GO:0015431: glutathione S-conjugate-exporting ATPase activity	0.00E+00
3	GO:1901149: salicylic acid binding	6.26E-05
4	GO:0090422: thiamine pyrophosphate transporter activity	6.26E-05
5	GO:0030775: glucuronoxylan 4-O-methyltransferase activity	1.52E-04
6	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	1.52E-04
7	GO:0019948: SUMO activating enzyme activity	2.57E-04
8	GO:0016174: NAD(P)H oxidase activity	2.57E-04
9	GO:0019201: nucleotide kinase activity	3.73E-04
10	GO:0008375: acetylglucosaminyltransferase activity	6.80E-04
11	GO:0004017: adenylate kinase activity	9.20E-04
12	GO:0004708: MAP kinase kinase activity	1.24E-03
13	GO:0008271: secondary active sulfate transmembrane transporter activity	1.41E-03
14	GO:0005509: calcium ion binding	1.59E-03
15	GO:0015171: amino acid transmembrane transporter activity	1.85E-03
16	GO:0005545: 1-phosphatidylinositol binding	1.96E-03
17	GO:0008047: enzyme activator activity	1.96E-03
18	GO:0008559: xenobiotic-transporting ATPase activity	2.17E-03
19	GO:0015116: sulfate transmembrane transporter activity	2.37E-03
20	GO:0030276: clathrin binding	5.59E-03
21	GO:0043531: ADP binding	6.87E-03
22	GO:0005200: structural constituent of cytoskeleton	7.70E-03
23	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	7.70E-03
24	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.01E-03
25	GO:0004683: calmodulin-dependent protein kinase activity	9.36E-03
26	GO:0015293: symporter activity	1.54E-02
27	GO:0031625: ubiquitin protein ligase binding	1.89E-02
28	GO:0003779: actin binding	2.21E-02
29	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.70E-02
30	GO:0019825: oxygen binding	2.91E-02
31	GO:0005525: GTP binding	3.36E-02
32	GO:0005524: ATP binding	3.64E-02
33	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.95E-02
34	GO:0004601: peroxidase activity	4.54E-02
35	GO:0016301: kinase activity	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0005901: caveola	1.52E-04
2	GO:0005885: Arp2/3 protein complex	9.20E-04
3	GO:0090404: pollen tube tip	2.17E-03
4	GO:0005905: clathrin-coated pit	3.98E-03
5	GO:0030136: clathrin-coated vesicle	5.03E-03
6	GO:0000145: exocyst	6.76E-03
7	GO:0019005: SCF ubiquitin ligase complex	1.01E-02
8	GO:0000325: plant-type vacuole	1.11E-02
9	GO:0005887: integral component of plasma membrane	1.56E-02
10	GO:0005635: nuclear envelope	1.84E-02
11	GO:0005654: nucleoplasm	2.60E-02