Gene: AT3G07340
     

Gene description


TAIR ID: AT3G07340

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -0.73

General responsiveness: -0.48

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G030762   GRMZM2G180406  

Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, regulation of transcription


GO cellular component


nucleus


GO molecular function


DNA binding, transcription factor activity, sequence-specific DNA binding, protein dimerization activity


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT1G24260, AT5G61850, AT2G43010

Target:
AT2G40890

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


15 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h-1.511.59E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.516.21E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.001.18E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.813.29E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.132.79E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.124.14E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.372.07E-13
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-2.009.59E-12
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-2.113.02E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.639.82E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.655.27E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.559.62E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.406.68E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h-1.761.08E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.762.52E-03






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