gene detail

Gene description

TAIR ID: AT3G07090

Short description: PPPDE putative thiol peptidase family protein

Pathogen responsiveness: 0.12

General responsiveness: 0.53

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G078887

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus, cytoplasm

GO molecular function

molecular_function

Protein domain

Pfam	PF05903, PPPDE putative peptidase domain
SMART	SM01179, DUF862

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT3G24050

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

23 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	2.62	4.70E-07
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	2.59	3.61E-07
GSE17464	Laer, control	Laer, Flg22 2 h	1.72	7.69E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-1.66	1.77E-09
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.76	5.00E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	1.54	3.86E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-1.56	4.42E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-1.72	4.45E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	1.63	1.94E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.40	9.15E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.93	5.40E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.42	4.98E-13
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.02	7.81E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.74	3.15E-13
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	1.75	9.85E-10
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.61	1.64E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.12	7.79E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	2.67	2.40E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	2.78	4.88E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min	2.98	2.56E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	2.61	4.07E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	2.95	3.91E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	2.92	8.72E-05