Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G07090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900151: regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay0.00E+00
2GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway4.26E-06
3GO:0010365: positive regulation of ethylene biosynthetic process4.26E-06
4GO:0060211: regulation of nuclear-transcribed mRNA poly(A) tail shortening4.26E-06
5GO:0051775: response to redox state4.26E-06
6GO:0019483: beta-alanine biosynthetic process1.18E-05
7GO:0050994: regulation of lipid catabolic process1.18E-05
8GO:0006212: uracil catabolic process1.18E-05
9GO:0007584: response to nutrient1.18E-05
10GO:0006556: S-adenosylmethionine biosynthetic process2.19E-05
11GO:0000187: activation of MAPK activity3.41E-05
12GO:0010107: potassium ion import4.83E-05
13GO:0048830: adventitious root development4.83E-05
14GO:0006096: glycolytic process6.92E-05
15GO:0009759: indole glucosinolate biosynthetic process8.11E-05
16GO:2000037: regulation of stomatal complex patterning9.94E-05
17GO:0043562: cellular response to nitrogen levels1.60E-04
18GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay1.83E-04
19GO:0009641: shade avoidance2.29E-04
20GO:0006995: cellular response to nitrogen starvation2.29E-04
21GO:0043085: positive regulation of catalytic activity2.53E-04
22GO:0009684: indoleacetic acid biosynthetic process2.53E-04
23GO:0009682: induced systemic resistance2.53E-04
24GO:0052544: defense response by callose deposition in cell wall2.53E-04
25GO:0010229: inflorescence development3.02E-04
26GO:0006094: gluconeogenesis3.02E-04
27GO:0006446: regulation of translational initiation3.28E-04
28GO:0000162: tryptophan biosynthetic process3.81E-04
29GO:0009814: defense response, incompatible interaction4.91E-04
30GO:0030433: ubiquitin-dependent ERAD pathway4.91E-04
31GO:0006730: one-carbon metabolic process4.91E-04
32GO:0010227: floral organ abscission5.20E-04
33GO:0009693: ethylene biosynthetic process5.20E-04
34GO:0009651: response to salt stress5.83E-04
35GO:0010118: stomatal movement6.08E-04
36GO:0010154: fruit development6.38E-04
37GO:0016032: viral process7.62E-04
38GO:0071281: cellular response to iron ion7.94E-04
39GO:0035556: intracellular signal transduction8.18E-04
40GO:0006904: vesicle docking involved in exocytosis8.59E-04
41GO:0010029: regulation of seed germination9.59E-04
42GO:0006887: exocytosis1.43E-03
43GO:0042542: response to hydrogen peroxide1.47E-03
44GO:0010114: response to red light1.51E-03
45GO:0009744: response to sucrose1.51E-03
46GO:0006468: protein phosphorylation1.64E-03
47GO:0000165: MAPK cascade1.71E-03
48GO:0042538: hyperosmotic salinity response1.75E-03
49GO:0048316: seed development2.10E-03
50GO:0009626: plant-type hypersensitive response2.14E-03
51GO:0046686: response to cadmium ion2.34E-03
52GO:0018105: peptidyl-serine phosphorylation2.37E-03
53GO:0006413: translational initiation3.20E-03
54GO:0040008: regulation of growth3.25E-03
55GO:0046777: protein autophosphorylation5.48E-03
56GO:0009408: response to heat6.85E-03
57GO:0006511: ubiquitin-dependent protein catabolic process1.27E-02
58GO:0009414: response to water deprivation1.66E-02
59GO:0042742: defense response to bacterium1.69E-02
60GO:0006979: response to oxidative stress1.70E-02
61GO:0009737: response to abscisic acid2.89E-02
62GO:0055114: oxidation-reduction process4.58E-02
RankGO TermAdjusted P value
1GO:0004157: dihydropyrimidinase activity0.00E+00
2GO:0015370: solute:sodium symporter activity0.00E+00
3GO:0019211: phosphatase activator activity0.00E+00
4GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity4.26E-06
5GO:0004478: methionine adenosyltransferase activity2.19E-05
6GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity3.41E-05
7GO:0015204: urea transmembrane transporter activity4.83E-05
8GO:0005515: protein binding1.02E-04
9GO:0004708: MAP kinase kinase activity1.39E-04
10GO:0005267: potassium channel activity1.60E-04
11GO:0030955: potassium ion binding2.05E-04
12GO:0004743: pyruvate kinase activity2.05E-04
13GO:0016301: kinase activity7.02E-04
14GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.59E-04
15GO:0004674: protein serine/threonine kinase activity9.37E-04
16GO:0009931: calcium-dependent protein serine/threonine kinase activity9.92E-04
17GO:0004683: calmodulin-dependent protein kinase activity1.03E-03
18GO:0005507: copper ion binding1.08E-03
19GO:0050661: NADP binding1.39E-03
20GO:0015293: symporter activity1.63E-03
21GO:0051287: NAD binding1.71E-03
22GO:0045735: nutrient reservoir activity2.05E-03
23GO:0003743: translation initiation factor activity3.73E-03
24GO:0000287: magnesium ion binding4.46E-03
25GO:0061630: ubiquitin protein ligase activity5.42E-03
26GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen6.25E-03
27GO:0005524: ATP binding7.97E-03
28GO:0019825: oxygen binding1.31E-02
29GO:0005516: calmodulin binding1.37E-02
30GO:0005506: iron ion binding1.67E-02
31GO:0004842: ubiquitin-protein transferase activity2.12E-02
32GO:0003729: mRNA binding2.24E-02
33GO:0020037: heme binding2.33E-02
RankGO TermAdjusted P value
1GO:0005829: cytosol1.61E-05
2GO:0070062: extracellular exosome3.41E-05
3GO:0005740: mitochondrial envelope2.29E-04
4GO:0005737: cytoplasm3.81E-04
5GO:0000145: exocyst7.62E-04
6GO:0000151: ubiquitin ligase complex1.10E-03
7GO:0005783: endoplasmic reticulum1.44E-03
8GO:0012505: endomembrane system2.28E-03
9GO:0016020: membrane4.02E-03
10GO:0005887: integral component of plasma membrane8.48E-03
11GO:0005886: plasma membrane1.46E-02
12GO:0009536: plastid1.95E-02
13GO:0005789: endoplasmic reticulum membrane2.28E-02
14GO:0005794: Golgi apparatus2.68E-02
15GO:0005774: vacuolar membrane4.09E-02
16GO:0048046: apoplast4.24E-02
17GO:0005618: cell wall4.51E-02
Gene type



Gene DE type