Gene: AT3G06140
     

Gene description


TAIR ID: AT3G06140

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -0.83

General responsiveness: -3.17

Orthologous


Rice:

OS05G0397650   OS10G0204100  

Maize: No orthologous gene
Wheat:

TA.25524.1.S1_AT  


GO biological process


protein ubiquitination


GO cellular component


cytoplasm


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF13920, Zinc finger, C3HC4 type (RING finger)
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.747.50E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.688.09E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.622.25E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.646.01E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.321.67E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.369.60E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.193.45E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.533.26E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.366.56E-11






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