GO Enrichment Analysis of Co-expressed Genes with
AT3G06140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015822: ornithine transport | 0.00E+00 |
| 2 | GO:0006573: valine metabolic process | 0.00E+00 |
| 3 | GO:0045489: pectin biosynthetic process | 7.81E-06 |
| 4 | GO:0007155: cell adhesion | 2.11E-05 |
| 5 | GO:0071370: cellular response to gibberellin stimulus | 5.34E-05 |
| 6 | GO:0006551: leucine metabolic process | 5.34E-05 |
| 7 | GO:0000066: mitochondrial ornithine transport | 5.34E-05 |
| 8 | GO:0080167: response to karrikin | 9.02E-05 |
| 9 | GO:0007154: cell communication | 1.30E-04 |
| 10 | GO:0060919: auxin influx | 1.30E-04 |
| 11 | GO:1903338: regulation of cell wall organization or biogenesis | 1.30E-04 |
| 12 | GO:0010253: UDP-rhamnose biosynthetic process | 2.22E-04 |
| 13 | GO:0070828: heterochromatin organization | 2.22E-04 |
| 14 | GO:0051016: barbed-end actin filament capping | 3.25E-04 |
| 15 | GO:0010583: response to cyclopentenone | 3.71E-04 |
| 16 | GO:0009694: jasmonic acid metabolic process | 4.35E-04 |
| 17 | GO:0006546: glycine catabolic process | 4.35E-04 |
| 18 | GO:0009813: flavonoid biosynthetic process | 6.77E-04 |
| 19 | GO:0009099: valine biosynthetic process | 8.05E-04 |
| 20 | GO:0009554: megasporogenesis | 8.05E-04 |
| 21 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 8.05E-04 |
| 22 | GO:0009082: branched-chain amino acid biosynthetic process | 8.05E-04 |
| 23 | GO:0017148: negative regulation of translation | 8.05E-04 |
| 24 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 8.74E-04 |
| 25 | GO:0006400: tRNA modification | 9.40E-04 |
| 26 | GO:0045010: actin nucleation | 1.08E-03 |
| 27 | GO:0052543: callose deposition in cell wall | 1.08E-03 |
| 28 | GO:0009097: isoleucine biosynthetic process | 1.23E-03 |
| 29 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 1.23E-03 |
| 30 | GO:0071555: cell wall organization | 1.30E-03 |
| 31 | GO:0006754: ATP biosynthetic process | 1.38E-03 |
| 32 | GO:0048589: developmental growth | 1.38E-03 |
| 33 | GO:0009056: catabolic process | 1.38E-03 |
| 34 | GO:0048829: root cap development | 1.71E-03 |
| 35 | GO:0000272: polysaccharide catabolic process | 1.88E-03 |
| 36 | GO:0030036: actin cytoskeleton organization | 2.25E-03 |
| 37 | GO:0009225: nucleotide-sugar metabolic process | 2.63E-03 |
| 38 | GO:0010167: response to nitrate | 2.63E-03 |
| 39 | GO:0005985: sucrose metabolic process | 2.63E-03 |
| 40 | GO:0006833: water transport | 2.83E-03 |
| 41 | GO:0006633: fatty acid biosynthetic process | 3.01E-03 |
| 42 | GO:0007010: cytoskeleton organization | 3.03E-03 |
| 43 | GO:0009695: jasmonic acid biosynthetic process | 3.24E-03 |
| 44 | GO:0003333: amino acid transmembrane transport | 3.46E-03 |
| 45 | GO:0031408: oxylipin biosynthetic process | 3.46E-03 |
| 46 | GO:0040007: growth | 3.90E-03 |
| 47 | GO:0000271: polysaccharide biosynthetic process | 4.60E-03 |
| 48 | GO:0080022: primary root development | 4.60E-03 |
| 49 | GO:0034220: ion transmembrane transport | 4.60E-03 |
| 50 | GO:0006342: chromatin silencing | 4.84E-03 |
| 51 | GO:0008360: regulation of cell shape | 4.84E-03 |
| 52 | GO:0016126: sterol biosynthetic process | 7.22E-03 |
| 53 | GO:0042128: nitrate assimilation | 7.79E-03 |
| 54 | GO:0016049: cell growth | 8.38E-03 |
| 55 | GO:0032259: methylation | 8.91E-03 |
| 56 | GO:0048767: root hair elongation | 8.99E-03 |
| 57 | GO:0010311: lateral root formation | 8.99E-03 |
| 58 | GO:0006865: amino acid transport | 9.93E-03 |
| 59 | GO:0016051: carbohydrate biosynthetic process | 1.02E-02 |
| 60 | GO:0009867: jasmonic acid mediated signaling pathway | 1.02E-02 |
| 61 | GO:0006839: mitochondrial transport | 1.12E-02 |
| 62 | GO:0009926: auxin polar transport | 1.23E-02 |
| 63 | GO:0042546: cell wall biogenesis | 1.26E-02 |
| 64 | GO:0031347: regulation of defense response | 1.40E-02 |
| 65 | GO:0009809: lignin biosynthetic process | 1.51E-02 |
| 66 | GO:0006096: glycolytic process | 1.70E-02 |
| 67 | GO:0051726: regulation of cell cycle | 2.02E-02 |
| 68 | GO:0006468: protein phosphorylation | 2.85E-02 |
| 69 | GO:0007166: cell surface receptor signaling pathway | 3.15E-02 |
| 70 | GO:0009617: response to bacterium | 3.25E-02 |
| 71 | GO:0055114: oxidation-reduction process | 3.51E-02 |
| 72 | GO:0009733: response to auxin | 3.77E-02 |
| 73 | GO:0009860: pollen tube growth | 4.12E-02 |
| 74 | GO:0007049: cell cycle | 4.23E-02 |
| 75 | GO:0006810: transport | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050421: nitrite reductase (NO-forming) activity | 0.00E+00 |
| 2 | GO:0030795: jasmonate O-methyltransferase activity | 0.00E+00 |
| 3 | GO:0102078: methyl jasmonate methylesterase activity | 0.00E+00 |
| 4 | GO:0047889: ferredoxin-nitrate reductase activity | 0.00E+00 |
| 5 | GO:0048307: ferredoxin-nitrite reductase activity | 0.00E+00 |
| 6 | GO:0045486: naringenin 3-dioxygenase activity | 5.34E-05 |
| 7 | GO:0010313: phytochrome binding | 5.34E-05 |
| 8 | GO:0003838: sterol 24-C-methyltransferase activity | 5.34E-05 |
| 9 | GO:0003984: acetolactate synthase activity | 5.34E-05 |
| 10 | GO:0046982: protein heterodimerization activity | 5.86E-05 |
| 11 | GO:0004047: aminomethyltransferase activity | 1.30E-04 |
| 12 | GO:0010280: UDP-L-rhamnose synthase activity | 1.30E-04 |
| 13 | GO:0000064: L-ornithine transmembrane transporter activity | 1.30E-04 |
| 14 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 1.30E-04 |
| 15 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.30E-04 |
| 16 | GO:0001872: (1->3)-beta-D-glucan binding | 3.25E-04 |
| 17 | GO:0048027: mRNA 5'-UTR binding | 3.25E-04 |
| 18 | GO:0010328: auxin influx transmembrane transporter activity | 4.35E-04 |
| 19 | GO:0045430: chalcone isomerase activity | 4.35E-04 |
| 20 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.47E-04 |
| 21 | GO:0045431: flavonol synthase activity | 5.52E-04 |
| 22 | GO:0030247: polysaccharide binding | 5.86E-04 |
| 23 | GO:0102229: amylopectin maltohydrolase activity | 6.76E-04 |
| 24 | GO:0016161: beta-amylase activity | 8.05E-04 |
| 25 | GO:0016621: cinnamoyl-CoA reductase activity | 9.40E-04 |
| 26 | GO:0004564: beta-fructofuranosidase activity | 1.08E-03 |
| 27 | GO:0003843: 1,3-beta-D-glucan synthase activity | 1.23E-03 |
| 28 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.38E-03 |
| 29 | GO:0030955: potassium ion binding | 1.54E-03 |
| 30 | GO:0004743: pyruvate kinase activity | 1.54E-03 |
| 31 | GO:0004575: sucrose alpha-glucosidase activity | 1.54E-03 |
| 32 | GO:0004672: protein kinase activity | 2.33E-03 |
| 33 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.43E-03 |
| 34 | GO:0031418: L-ascorbic acid binding | 3.03E-03 |
| 35 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 3.68E-03 |
| 36 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.95E-03 |
| 37 | GO:0003677: DNA binding | 4.49E-03 |
| 38 | GO:0016853: isomerase activity | 5.09E-03 |
| 39 | GO:0019901: protein kinase binding | 5.34E-03 |
| 40 | GO:0004518: nuclease activity | 5.86E-03 |
| 41 | GO:0051015: actin filament binding | 6.12E-03 |
| 42 | GO:0005200: structural constituent of cytoskeleton | 6.66E-03 |
| 43 | GO:0008483: transaminase activity | 6.66E-03 |
| 44 | GO:0016597: amino acid binding | 6.94E-03 |
| 45 | GO:0015250: water channel activity | 7.22E-03 |
| 46 | GO:0016757: transferase activity, transferring glycosyl groups | 8.33E-03 |
| 47 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 9.30E-03 |
| 48 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.12E-02 |
| 49 | GO:0015293: symporter activity | 1.33E-02 |
| 50 | GO:0003777: microtubule motor activity | 1.63E-02 |
| 51 | GO:0015171: amino acid transmembrane transporter activity | 1.63E-02 |
| 52 | GO:0045735: nutrient reservoir activity | 1.70E-02 |
| 53 | GO:0003779: actin binding | 1.90E-02 |
| 54 | GO:0016758: transferase activity, transferring hexosyl groups | 2.24E-02 |
| 55 | GO:0005507: copper ion binding | 2.36E-02 |
| 56 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.73E-02 |
| 57 | GO:0008017: microtubule binding | 2.96E-02 |
| 58 | GO:0005215: transporter activity | 3.71E-02 |
| 59 | GO:0000287: magnesium ion binding | 3.86E-02 |
| 60 | GO:0003682: chromatin binding | 4.07E-02 |
| 61 | GO:0052689: carboxylic ester hydrolase activity | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 2 | GO:0005721: pericentric heterochromatin | 0.00E+00 |
| 3 | GO:0000786: nucleosome | 1.08E-06 |
| 4 | GO:0046658: anchored component of plasma membrane | 2.10E-06 |
| 5 | GO:0009505: plant-type cell wall | 4.79E-06 |
| 6 | GO:0009506: plasmodesma | 6.36E-06 |
| 7 | GO:0000792: heterochromatin | 1.30E-04 |
| 8 | GO:0031225: anchored component of membrane | 1.38E-04 |
| 9 | GO:0005775: vacuolar lumen | 3.25E-04 |
| 10 | GO:0000139: Golgi membrane | 4.09E-04 |
| 11 | GO:0005886: plasma membrane | 6.32E-04 |
| 12 | GO:0005618: cell wall | 6.66E-04 |
| 13 | GO:0000148: 1,3-beta-D-glucan synthase complex | 1.23E-03 |
| 14 | GO:0005794: Golgi apparatus | 1.39E-03 |
| 15 | GO:0000790: nuclear chromatin | 4.36E-03 |
| 16 | GO:0016020: membrane | 7.16E-03 |
| 17 | GO:0005774: vacuolar membrane | 8.56E-03 |
| 18 | GO:0000325: plant-type vacuole | 9.61E-03 |
| 19 | GO:0031902: late endosome membrane | 1.16E-02 |
| 20 | GO:0031977: thylakoid lumen | 1.16E-02 |
| 21 | GO:0016021: integral component of membrane | 1.19E-02 |
| 22 | GO:0005856: cytoskeleton | 1.33E-02 |
| 23 | GO:0009579: thylakoid | 1.98E-02 |
| 24 | GO:0009570: chloroplast stroma | 2.23E-02 |
| 25 | GO:0009543: chloroplast thylakoid lumen | 2.28E-02 |
| 26 | GO:0005802: trans-Golgi network | 2.66E-02 |
| 27 | GO:0005768: endosome | 3.02E-02 |
| 28 | GO:0048046: apoplast | 3.46E-02 |
| 29 | GO:0009536: plastid | 4.11E-02 |
| 30 | GO:0005874: microtubule | 4.45E-02 |