Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G06140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900000: regulation of anthocyanin catabolic process0.00E+00
2GO:0042547: cell wall modification involved in multidimensional cell growth7.41E-06
3GO:0034628: 'de novo' NAD biosynthetic process from aspartate7.41E-06
4GO:0051176: positive regulation of sulfur metabolic process3.67E-05
5GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement3.67E-05
6GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition3.67E-05
7GO:0045038: protein import into chloroplast thylakoid membrane1.04E-04
8GO:0009435: NAD biosynthetic process1.04E-04
9GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.30E-04
10GO:0016554: cytidine to uridine editing1.30E-04
11GO:0051510: regulation of unidimensional cell growth1.88E-04
12GO:0006614: SRP-dependent cotranslational protein targeting to membrane1.88E-04
13GO:0009690: cytokinin metabolic process2.20E-04
14GO:0009060: aerobic respiration2.85E-04
15GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process3.19E-04
16GO:1900865: chloroplast RNA modification3.19E-04
17GO:0009814: defense response, incompatible interaction7.45E-04
18GO:0016226: iron-sulfur cluster assembly7.45E-04
19GO:0042631: cellular response to water deprivation9.19E-04
20GO:0009741: response to brassinosteroid9.64E-04
21GO:0009791: post-embryonic development1.06E-03
22GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.10E-03
23GO:0006096: glycolytic process3.16E-03
24GO:0048316: seed development3.23E-03
25GO:0009742: brassinosteroid mediated signaling pathway3.73E-03
26GO:0009845: seed germination4.41E-03
27GO:0042744: hydrogen peroxide catabolic process4.57E-03
28GO:0045490: pectin catabolic process5.21E-03
29GO:0009826: unidimensional cell growth6.86E-03
30GO:0046777: protein autophosphorylation8.57E-03
31GO:0009735: response to cytokinin1.51E-02
32GO:0009738: abscisic acid-activated signaling pathway1.58E-02
33GO:0035556: intracellular signal transduction1.68E-02
34GO:0055114: oxidation-reduction process2.23E-02
35GO:0006468: protein phosphorylation2.24E-02
36GO:0006979: response to oxidative stress2.68E-02
37GO:0007165: signal transduction4.50E-02
38GO:0009737: response to abscisic acid4.57E-02
RankGO TermAdjusted P value
1GO:1990534: thermospermine oxidase activity0.00E+00
2GO:0005048: signal sequence binding0.00E+00
3GO:0008987: quinolinate synthetase A activity0.00E+00
4GO:0080062: cytokinin 9-beta-glucosyltransferase activity7.41E-06
5GO:0047807: cytokinin 7-beta-glucosyltransferase activity7.41E-06
6GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity7.90E-05
7GO:0008312: 7S RNA binding2.20E-04
8GO:0008047: enzyme activator activity3.54E-04
9GO:0008131: primary amine oxidase activity5.02E-04
10GO:0019706: protein-cysteine S-palmitoyltransferase activity7.02E-04
11GO:0030570: pectate lyase activity7.88E-04
12GO:0051539: 4 iron, 4 sulfur cluster binding2.13E-03
13GO:0080043: quercetin 3-O-glucosyltransferase activity3.37E-03
14GO:0080044: quercetin 7-O-glucosyltransferase activity3.37E-03
15GO:0004672: protein kinase activity4.24E-03
16GO:0003729: mRNA binding4.29E-03
17GO:0016829: lyase activity4.41E-03
18GO:0008194: UDP-glycosyltransferase activity5.63E-03
19GO:0004601: peroxidase activity7.04E-03
20GO:0042803: protein homodimerization activity9.58E-03
21GO:0003924: GTPase activity1.07E-02
22GO:0004519: endonuclease activity1.14E-02
23GO:0004674: protein serine/threonine kinase activity1.42E-02
24GO:0016740: transferase activity1.86E-02
25GO:0005525: GTP binding2.30E-02
26GO:0046872: metal ion binding2.78E-02
27GO:0004842: ubiquitin-protein transferase activity3.36E-02
28GO:0020037: heme binding3.69E-02
29GO:0016787: hydrolase activity4.59E-02
30GO:0016301: kinase activity4.85E-02
RankGO TermAdjusted P value
1GO:0080085: signal recognition particle, chloroplast targeting2.00E-05
2GO:0005786: signal recognition particle, endoplasmic reticulum targeting2.52E-04
3GO:0030659: cytoplasmic vesicle membrane5.02E-04
4GO:0046658: anchored component of plasma membrane6.32E-03
5GO:0009507: chloroplast8.25E-03
6GO:0043231: intracellular membrane-bounded organelle1.15E-02
7GO:0009570: chloroplast stroma1.90E-02
8GO:0031225: anchored component of membrane2.21E-02
9GO:0009536: plastid3.08E-02
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Gene type



Gene DE type