gene detail

Gene description

TAIR ID: AT3G05625

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G371670

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

chloroplast stroma, chloroplast

GO molecular function

unkown

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.77	1.35E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.62	3.12E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.90	2.60E-10
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	-1.85	9.92E-09
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.72	1.14E-08
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.60	8.63E-08
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.71	9.87E-09
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-1.63	2.10E-07