gene detail

Gene description

TAIR ID: AT3G02230

Short description: reversibly glycosylated polypeptide 1

Pathogen responsiveness: -0.18

General responsiveness: 0.05

Orthologous

Rice:

OS03G0599800

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

pollen development, UDP-L-arabinose metabolic process, plant-type cell wall organization or biogenesis, response to salt stress, cell wall organization, plant-type cell wall biogenesis, cellulose biosynthetic process

GO cellular component

vacuolar membrane, cytosol, Golgi apparatus, Golgi stack, Golgi trans cisterna, cytosolic ribosome, nucleus, cell wall

GO molecular function

protein binding, intramolecular transferase activity, cellulose synthase (UDP-forming) activity, UDP-arabinopyranose mutase activity

Protein domain

Pfam	PF03214, Reversibly glycosylated polypeptide

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath00520: Amino sugar and nucleotide sugar metabolism

Transcriptional regulation

Regulator:
AT3G14230

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.12	6.92E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.65	3.48E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.04	1.36E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	3.78	1.74E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.88	1.06E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	4.06	5.33E-12
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.94	1.06E-10
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.35	8.56E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.84	1.43E-13
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	1.69	1.26E-09
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.81	1.93E-08
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.72	5.32E-08
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	1.59	1.14E-06
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	1.56	5.29E-09
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.91	1.55E-02