co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0071985: multivesicular body sorting pathway	0.00E+00
4	GO:0006102: isocitrate metabolic process	5.30E-07
5	GO:0006099: tricarboxylic acid cycle	8.14E-06
6	GO:0006605: protein targeting	5.73E-05
7	GO:0042350: GDP-L-fucose biosynthetic process	1.00E-04
8	GO:1990641: response to iron ion starvation	1.00E-04
9	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.00E-04
10	GO:0006680: glucosylceramide catabolic process	1.00E-04
11	GO:1900384: regulation of flavonol biosynthetic process	1.00E-04
12	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	2.36E-04
13	GO:0006101: citrate metabolic process	2.36E-04
14	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.36E-04
15	GO:0031648: protein destabilization	2.36E-04
16	GO:0015709: thiosulfate transport	2.36E-04
17	GO:0071422: succinate transmembrane transport	2.36E-04
18	GO:0009805: coumarin biosynthetic process	2.36E-04
19	GO:0034976: response to endoplasmic reticulum stress	2.91E-04
20	GO:0015031: protein transport	3.80E-04
21	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	3.92E-04
22	GO:0072661: protein targeting to plasma membrane	3.92E-04
23	GO:0006517: protein deglycosylation	3.92E-04
24	GO:0010272: response to silver ion	3.92E-04
25	GO:0015729: oxaloacetate transport	5.64E-04
26	GO:0009226: nucleotide-sugar biosynthetic process	5.64E-04
27	GO:1902584: positive regulation of response to water deprivation	7.50E-04
28	GO:0006621: protein retention in ER lumen	7.50E-04
29	GO:0045927: positive regulation of growth	9.47E-04
30	GO:0071423: malate transmembrane transport	9.47E-04
31	GO:0006097: glyoxylate cycle	9.47E-04
32	GO:0051607: defense response to virus	1.05E-03
33	GO:0006555: methionine metabolic process	1.16E-03
34	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.16E-03
35	GO:0035435: phosphate ion transmembrane transport	1.16E-03
36	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.16E-03
37	GO:0019509: L-methionine salvage from methylthioadenosine	1.38E-03
38	GO:0034389: lipid particle organization	1.38E-03
39	GO:0080186: developmental vegetative growth	1.62E-03
40	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.62E-03
41	GO:0008272: sulfate transport	1.62E-03
42	GO:0050829: defense response to Gram-negative bacterium	1.62E-03
43	GO:0006491: N-glycan processing	1.87E-03
44	GO:0006002: fructose 6-phosphate metabolic process	2.14E-03
45	GO:0009699: phenylpropanoid biosynthetic process	2.14E-03
46	GO:0046686: response to cadmium ion	2.34E-03
47	GO:0010112: regulation of systemic acquired resistance	2.41E-03
48	GO:0009056: catabolic process	2.41E-03
49	GO:0016192: vesicle-mediated transport	2.55E-03
50	GO:0010205: photoinhibition	2.70E-03
51	GO:0006032: chitin catabolic process	3.00E-03
52	GO:0009688: abscisic acid biosynthetic process	3.00E-03
53	GO:0006886: intracellular protein transport	3.13E-03
54	GO:0000272: polysaccharide catabolic process	3.31E-03
55	GO:0006417: regulation of translation	3.44E-03
56	GO:0045037: protein import into chloroplast stroma	3.63E-03
57	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.63E-03
58	GO:0010102: lateral root morphogenesis	3.95E-03
59	GO:0009620: response to fungus	4.04E-03
60	GO:0006446: regulation of translational initiation	4.30E-03
61	GO:0090351: seedling development	4.64E-03
62	GO:0007033: vacuole organization	4.64E-03
63	GO:0010053: root epidermal cell differentiation	4.64E-03
64	GO:0000162: tryptophan biosynthetic process	5.00E-03
65	GO:0006874: cellular calcium ion homeostasis	5.75E-03
66	GO:0051302: regulation of cell division	5.75E-03
67	GO:0019915: lipid storage	6.14E-03
68	GO:0016998: cell wall macromolecule catabolic process	6.14E-03
69	GO:0030433: ubiquitin-dependent ERAD pathway	6.54E-03
70	GO:0031348: negative regulation of defense response	6.54E-03
71	GO:0019748: secondary metabolic process	6.54E-03
72	GO:0010150: leaf senescence	7.61E-03
73	GO:0042147: retrograde transport, endosome to Golgi	7.78E-03
74	GO:0010118: stomatal movement	8.21E-03
75	GO:0010182: sugar mediated signaling pathway	8.65E-03
76	GO:0009617: response to bacterium	9.09E-03
77	GO:0006623: protein targeting to vacuole	9.56E-03
78	GO:0006891: intra-Golgi vesicle-mediated transport	1.00E-02
79	GO:0006457: protein folding	1.13E-02
80	GO:0009615: response to virus	1.30E-02
81	GO:0009816: defense response to bacterium, incompatible interaction	1.35E-02
82	GO:0006906: vesicle fusion	1.40E-02
83	GO:0009627: systemic acquired resistance	1.40E-02
84	GO:0009817: defense response to fungus, incompatible interaction	1.57E-02
85	GO:0009407: toxin catabolic process	1.68E-02
86	GO:0010043: response to zinc ion	1.74E-02
87	GO:0045454: cell redox homeostasis	1.76E-02
88	GO:0006839: mitochondrial transport	2.03E-02
89	GO:0006887: exocytosis	2.10E-02
90	GO:0009751: response to salicylic acid	2.14E-02
91	GO:0051707: response to other organism	2.22E-02
92	GO:0009644: response to high light intensity	2.35E-02
93	GO:0008643: carbohydrate transport	2.35E-02
94	GO:0009636: response to toxic substance	2.41E-02
95	GO:0009965: leaf morphogenesis	2.41E-02
96	GO:0009846: pollen germination	2.61E-02
97	GO:0009736: cytokinin-activated signaling pathway	2.75E-02
98	GO:0009651: response to salt stress	2.91E-02
99	GO:0009909: regulation of flower development	2.95E-02
100	GO:0009734: auxin-activated signaling pathway	3.05E-02
101	GO:0006096: glycolytic process	3.09E-02
102	GO:0016569: covalent chromatin modification	3.38E-02
103	GO:0042545: cell wall modification	3.46E-02
104	GO:0006413: translational initiation	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
2	GO:0004449: isocitrate dehydrogenase (NAD+) activity	4.78E-06
3	GO:0030942: endoplasmic reticulum signal peptide binding	1.00E-04
4	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.00E-04
5	GO:0032266: phosphatidylinositol-3-phosphate binding	1.00E-04
6	GO:0004348: glucosylceramidase activity	1.00E-04
7	GO:0009000: selenocysteine lyase activity	1.00E-04
8	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.00E-04
9	GO:0050577: GDP-L-fucose synthase activity	1.00E-04
10	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.00E-04
11	GO:0015117: thiosulfate transmembrane transporter activity	2.36E-04
12	GO:1901677: phosphate transmembrane transporter activity	2.36E-04
13	GO:0010297: heteropolysaccharide binding	2.36E-04
14	GO:0003994: aconitate hydratase activity	2.36E-04
15	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	3.92E-04
16	GO:0005310: dicarboxylic acid transmembrane transporter activity	3.92E-04
17	GO:0015141: succinate transmembrane transporter activity	3.92E-04
18	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	3.92E-04
19	GO:0003756: protein disulfide isomerase activity	5.10E-04
20	GO:0015131: oxaloacetate transmembrane transporter activity	5.64E-04
21	GO:0016656: monodehydroascorbate reductase (NADH) activity	5.64E-04
22	GO:0017077: oxidative phosphorylation uncoupler activity	5.64E-04
23	GO:0046923: ER retention sequence binding	7.50E-04
24	GO:0030151: molybdenum ion binding	9.47E-04
25	GO:0003872: 6-phosphofructokinase activity	1.62E-03
26	GO:0015140: malate transmembrane transporter activity	1.62E-03
27	GO:0008320: protein transmembrane transporter activity	1.62E-03
28	GO:0008312: 7S RNA binding	1.87E-03
29	GO:0004869: cysteine-type endopeptidase inhibitor activity	1.87E-03
30	GO:0045309: protein phosphorylated amino acid binding	2.70E-03
31	GO:0030234: enzyme regulator activity	3.00E-03
32	GO:0004568: chitinase activity	3.00E-03
33	GO:0019904: protein domain specific binding	3.31E-03
34	GO:0031625: ubiquitin protein ligase binding	3.44E-03
35	GO:0015116: sulfate transmembrane transporter activity	3.63E-03
36	GO:0005217: intracellular ligand-gated ion channel activity	4.64E-03
37	GO:0008061: chitin binding	4.64E-03
38	GO:0004970: ionotropic glutamate receptor activity	4.64E-03
39	GO:0043130: ubiquitin binding	5.37E-03
40	GO:0016779: nucleotidyltransferase activity	6.54E-03
41	GO:0016887: ATPase activity	6.83E-03
42	GO:0004499: N,N-dimethylaniline monooxygenase activity	7.35E-03
43	GO:0008514: organic anion transmembrane transporter activity	7.35E-03
44	GO:0050662: coenzyme binding	9.10E-03
45	GO:0016853: isomerase activity	9.10E-03
46	GO:0004872: receptor activity	9.56E-03
47	GO:0051213: dioxygenase activity	1.30E-02
48	GO:0050660: flavin adenine dinucleotide binding	1.37E-02
49	GO:0008375: acetylglucosaminyltransferase activity	1.40E-02
50	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.46E-02
51	GO:0004497: monooxygenase activity	1.47E-02
52	GO:0004871: signal transducer activity	1.84E-02
53	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.86E-02
54	GO:0003746: translation elongation factor activity	1.86E-02
55	GO:0000149: SNARE binding	1.97E-02
56	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.97E-02
57	GO:0042393: histone binding	2.03E-02
58	GO:0051539: 4 iron, 4 sulfur cluster binding	2.03E-02
59	GO:0050661: NADP binding	2.03E-02
60	GO:0004364: glutathione transferase activity	2.16E-02
61	GO:0005484: SNAP receptor activity	2.22E-02
62	GO:0005198: structural molecule activity	2.41E-02
63	GO:0051287: NAD binding	2.55E-02
64	GO:0045330: aspartyl esterase activity	2.95E-02
65	GO:0022857: transmembrane transporter activity	3.38E-02
66	GO:0030599: pectinesterase activity	3.38E-02
67	GO:0016746: transferase activity, transferring acyl groups	3.61E-02
68	GO:0015035: protein disulfide oxidoreductase activity	3.61E-02
69	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.22E-02
70	GO:0030170: pyridoxal phosphate binding	4.46E-02
71	GO:0046910: pectinesterase inhibitor activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	2.30E-06
2	GO:0045252: oxoglutarate dehydrogenase complex	1.00E-04
3	GO:0005789: endoplasmic reticulum membrane	1.13E-04
4	GO:0000814: ESCRT II complex	2.36E-04
5	GO:0030130: clathrin coat of trans-Golgi network vesicle	3.92E-04
6	GO:0030132: clathrin coat of coated pit	3.92E-04
7	GO:0005886: plasma membrane	4.86E-04
8	GO:0030658: transport vesicle membrane	5.64E-04
9	GO:0005945: 6-phosphofructokinase complex	9.47E-04
10	GO:0005788: endoplasmic reticulum lumen	1.17E-03
11	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.62E-03
12	GO:0031902: late endosome membrane	2.14E-03
13	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.14E-03
14	GO:0005811: lipid particle	2.14E-03
15	GO:0031901: early endosome membrane	2.41E-03
16	GO:0030665: clathrin-coated vesicle membrane	2.70E-03
17	GO:0008540: proteasome regulatory particle, base subcomplex	2.70E-03
18	GO:0017119: Golgi transport complex	3.00E-03
19	GO:0005635: nuclear envelope	3.33E-03
20	GO:0005783: endoplasmic reticulum	3.66E-03
21	GO:0016021: integral component of membrane	3.87E-03
22	GO:0005769: early endosome	5.00E-03
23	GO:0009506: plasmodesma	5.36E-03
24	GO:0009505: plant-type cell wall	6.66E-03
25	GO:0005770: late endosome	8.65E-03
26	GO:0009504: cell plate	9.56E-03
27	GO:0031965: nuclear membrane	9.56E-03
28	GO:0019898: extrinsic component of membrane	9.56E-03
29	GO:0046658: anchored component of plasma membrane	1.01E-02
30	GO:0071944: cell periphery	1.10E-02
31	GO:0032580: Golgi cisterna membrane	1.15E-02
32	GO:0005768: endosome	1.74E-02
33	GO:0005819: spindle	1.97E-02
34	GO:0005773: vacuole	1.97E-02
35	GO:0031201: SNARE complex	2.10E-02
36	GO:0000502: proteasome complex	2.75E-02
37	GO:0000139: Golgi membrane	2.90E-02
38	GO:0005774: vacuolar membrane	3.05E-02
39	GO:0005829: cytosol	3.65E-02
40	GO:0009543: chloroplast thylakoid lumen	4.14E-02
41	GO:0005623: cell	4.22E-02
42	GO:0009524: phragmoplast	4.30E-02