Gene: AT3G02040
Gene description
TAIR ID: AT3G02040
Short description: senescence-related gene 3
Pathogen responsiveness: 0.66
General responsiveness: -0.48
GO biological process
glycerophospholipid catabolic process, glycerol metabolic process, cellular phosphate ion homeostasis
GO cellular component
cytoplasm, cell, plastid, chloroplast
GO molecular function
magnesium ion binding, glycerophosphodiester phosphodiesterase activity
Metabolic pathway
PWY-6952: glycerophosphodiester degradation
PWY0-381: glycerol and glycerophosphodiester degradation
KEGG pathway
Not involved in KEGG pathway
Transcriptional regulation
Regulator:
AT5G13790, AT3G16857, AT4G16110, AT1G24260, AT2G20180, AT4G36990
Target:
none
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
28 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE12856 | Col, WT, control | Col, WT, Bg h | 2.57 | 2.37E-07 |
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | 1.82 | 3.82E-06 |
| GSE13739 | Col, WT, control 0 h | Col, WT, G.orontii 6 h | 1.57 | 4.06E-02 |
| GSE13739 | Col, eds, control 0 h | Col, eds, G.orontii 6 h | 1.88 | 1.23E-02 |
| GSE13739 | Col, eds, control 7 d | Col, eds, G.orontii 7 d | 1.69 | 1.91E-02 |
| GSE17464 | Penta, control | Penta, PstDC3000 12 h | -2.02 | 2.12E-02 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 18 h | 3.02 | 1.09E-04 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 36 h | 3.74 | 5.97E-06 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 96 h | 1.75 | 2.80E-02 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 18 h | 3.74 | 5.85E-06 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | 5.02 | 3.98E-08 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.60 | 2.01E-02 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 1.93 | 2.10E-09 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.74 | 8.60E-09 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 4.37 | 3.29E-05 |
| GSE50526 | Col, WT, mock 9 h | Col, WT, A. brassicicola 9 h | 3.54 | 9.95E-05 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 1.97 | 8.40E-05 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | 1.69 | 9.31E-05 |
| GSE56094 | Col, WT, control 11 h | Col, WT, hrpA- 11 h | 1.62 | 3.24E-04 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 2.43 | 3.38E-08 |
| GSE56094 | Col, WT, control 4 h | Col, WT, PstDC3000 4 h | 1.72 | 2.48E-04 |
| GSE56094 | Col, WT, control 4 h | Col, WT, hrpA- 4 h | 1.69 | 1.48E-03 |
| GSE56094 | Col, WT, control 5 h | Col, WT, hrpA- 5 h | 2.25 | 3.48E-06 |
| GSE56094 | Col, WT, control 7 h | Col, WT, hrpA- 7 h | 1.66 | 3.93E-04 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 2.15 | 1.21E-03 |
| GSE6176 | Col, WT, control 4 h | Col, WT, PstDC3000 AvrRpm1 4 h | 1.80 | 1.35E-03 |
| GSE6176 | Col, WT, control 4 h | Col, WT, PstDC3000 HrpA- 4 h | 1.72 | 9.75E-03 |
| GSE6176 | Col, WT, control 4 h | Col, WT, PstDC3000 4 h | 1.63 | 1.26E-02 |
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