co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009398: FMN biosynthetic process	0.00E+00
2	GO:0006793: phosphorus metabolic process	0.00E+00
3	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
4	GO:0016036: cellular response to phosphate starvation	1.93E-07
5	GO:0009626: plant-type hypersensitive response	2.05E-06
6	GO:0055062: phosphate ion homeostasis	2.67E-05
7	GO:0003400: regulation of COPII vesicle coating	3.50E-05
8	GO:0046506: sulfolipid biosynthetic process	3.50E-05
9	GO:1900424: regulation of defense response to bacterium	3.50E-05
10	GO:0080093: regulation of photorespiration	3.50E-05
11	GO:0031998: regulation of fatty acid beta-oxidation	3.50E-05
12	GO:0042742: defense response to bacterium	7.50E-05
13	GO:1902000: homogentisate catabolic process	8.78E-05
14	GO:0051592: response to calcium ion	8.78E-05
15	GO:0051262: protein tetramerization	8.78E-05
16	GO:0080040: positive regulation of cellular response to phosphate starvation	8.78E-05
17	GO:0006817: phosphate ion transport	1.24E-04
18	GO:0010351: lithium ion transport	1.52E-04
19	GO:0009072: aromatic amino acid family metabolic process	1.52E-04
20	GO:0010581: regulation of starch biosynthetic process	1.52E-04
21	GO:0006882: cellular zinc ion homeostasis	2.25E-04
22	GO:0009617: response to bacterium	2.28E-04
23	GO:0055085: transmembrane transport	2.77E-04
24	GO:0045727: positive regulation of translation	3.05E-04
25	GO:1902584: positive regulation of response to water deprivation	3.05E-04
26	GO:0016311: dephosphorylation	3.65E-04
27	GO:0006097: glyoxylate cycle	3.89E-04
28	GO:0009247: glycolipid biosynthetic process	3.89E-04
29	GO:0045927: positive regulation of growth	3.89E-04
30	GO:0006796: phosphate-containing compound metabolic process	4.78E-04
31	GO:0010337: regulation of salicylic acid metabolic process	4.78E-04
32	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	4.78E-04
33	GO:0006099: tricarboxylic acid cycle	5.06E-04
34	GO:0015977: carbon fixation	5.70E-04
35	GO:0030643: cellular phosphate ion homeostasis	5.70E-04
36	GO:0034389: lipid particle organization	5.70E-04
37	GO:0030026: cellular manganese ion homeostasis	6.66E-04
38	GO:0006955: immune response	6.66E-04
39	GO:0080186: developmental vegetative growth	6.66E-04
40	GO:0008643: carbohydrate transport	6.67E-04
41	GO:0009231: riboflavin biosynthetic process	7.68E-04
42	GO:0010262: somatic embryogenesis	8.71E-04
43	GO:0046685: response to arsenic-containing substance	9.78E-04
44	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.20E-03
45	GO:0006032: chitin catabolic process	1.20E-03
46	GO:0015770: sucrose transport	1.32E-03
47	GO:0000272: polysaccharide catabolic process	1.32E-03
48	GO:0015706: nitrate transport	1.44E-03
49	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.44E-03
50	GO:0009611: response to wounding	1.44E-03
51	GO:0006108: malate metabolic process	1.57E-03
52	GO:0010167: response to nitrate	1.84E-03
53	GO:0006874: cellular calcium ion homeostasis	2.26E-03
54	GO:0016998: cell wall macromolecule catabolic process	2.41E-03
55	GO:0035428: hexose transmembrane transport	2.56E-03
56	GO:0009306: protein secretion	2.87E-03
57	GO:0046323: glucose import	3.36E-03
58	GO:0006814: sodium ion transport	3.53E-03
59	GO:0080167: response to karrikin	3.70E-03
60	GO:0010193: response to ozone	3.88E-03
61	GO:1901657: glycosyl compound metabolic process	4.24E-03
62	GO:0006904: vesicle docking involved in exocytosis	4.60E-03
63	GO:0051607: defense response to virus	4.80E-03
64	GO:0009816: defense response to bacterium, incompatible interaction	5.18E-03
65	GO:0042128: nitrate assimilation	5.38E-03
66	GO:0006888: ER to Golgi vesicle-mediated transport	5.58E-03
67	GO:0008219: cell death	5.99E-03
68	GO:0009407: toxin catabolic process	6.40E-03
69	GO:0006952: defense response	7.62E-03
70	GO:0006887: exocytosis	7.95E-03
71	GO:0042542: response to hydrogen peroxide	8.18E-03
72	GO:0051707: response to other organism	8.41E-03
73	GO:0006812: cation transport	9.86E-03
74	GO:0009624: response to nematode	1.33E-02
75	GO:0006470: protein dephosphorylation	2.15E-02
76	GO:0007166: cell surface receptor signaling pathway	2.15E-02
77	GO:0048366: leaf development	3.00E-02
78	GO:0010200: response to chitin	3.19E-02
79	GO:0044550: secondary metabolite biosynthetic process	3.31E-02
80	GO:0015979: photosynthesis	3.42E-02
81	GO:0032259: methylation	3.98E-02
82	GO:0009751: response to salicylic acid	4.07E-02
83	GO:0009408: response to heat	4.11E-02

Rank	GO Term	Adjusted P value
1	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
2	GO:0008531: riboflavin kinase activity	0.00E+00
3	GO:0046507: UDPsulfoquinovose synthase activity	0.00E+00
4	GO:0005090: Sar guanyl-nucleotide exchange factor activity	3.50E-05
5	GO:0080042: ADP-glucose pyrophosphohydrolase activity	3.50E-05
6	GO:0004725: protein tyrosine phosphatase activity	6.61E-05
7	GO:0080041: ADP-ribose pyrophosphohydrolase activity	8.78E-05
8	GO:0017110: nucleoside-diphosphatase activity	8.78E-05
9	GO:0003919: FMN adenylyltransferase activity	8.78E-05
10	GO:0022891: substrate-specific transmembrane transporter activity	1.13E-04
11	GO:0008964: phosphoenolpyruvate carboxylase activity	1.52E-04
12	GO:0005351: sugar:proton symporter activity	1.73E-04
13	GO:0016791: phosphatase activity	2.46E-04
14	GO:0015368: calcium:cation antiporter activity	3.05E-04
15	GO:0015369: calcium:proton antiporter activity	3.05E-04
16	GO:0004721: phosphoprotein phosphatase activity	3.47E-04
17	GO:0000104: succinate dehydrogenase activity	3.89E-04
18	GO:0047631: ADP-ribose diphosphatase activity	3.89E-04
19	GO:0015145: monosaccharide transmembrane transporter activity	3.89E-04
20	GO:0000210: NAD+ diphosphatase activity	4.78E-04
21	GO:0016462: pyrophosphatase activity	4.78E-04
22	GO:0016615: malate dehydrogenase activity	4.78E-04
23	GO:0008420: CTD phosphatase activity	4.78E-04
24	GO:0051020: GTPase binding	5.70E-04
25	GO:0030060: L-malate dehydrogenase activity	5.70E-04
26	GO:0008506: sucrose:proton symporter activity	6.66E-04
27	GO:0004427: inorganic diphosphatase activity	6.66E-04
28	GO:0015491: cation:cation antiporter activity	7.68E-04
29	GO:0015112: nitrate transmembrane transporter activity	1.09E-03
30	GO:0004568: chitinase activity	1.20E-03
31	GO:0005315: inorganic phosphate transmembrane transporter activity	1.57E-03
32	GO:0015114: phosphate ion transmembrane transporter activity	1.57E-03
33	GO:0015144: carbohydrate transmembrane transporter activity	1.69E-03
34	GO:0008061: chitin binding	1.84E-03
35	GO:0008146: sulfotransferase activity	1.84E-03
36	GO:0000287: magnesium ion binding	2.93E-03
37	GO:0004601: peroxidase activity	2.99E-03
38	GO:0043531: ADP binding	3.27E-03
39	GO:0005355: glucose transmembrane transporter activity	3.53E-03
40	GO:0050662: coenzyme binding	3.53E-03
41	GO:0102483: scopolin beta-glucosidase activity	5.58E-03
42	GO:0005096: GTPase activator activity	6.19E-03
43	GO:0003993: acid phosphatase activity	7.27E-03
44	GO:0008422: beta-glucosidase activity	7.49E-03
45	GO:0004364: glutathione transferase activity	8.18E-03
46	GO:0015293: symporter activity	9.12E-03
47	GO:0051287: NAD binding	9.61E-03
48	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.86E-02
49	GO:0005215: transporter activity	2.17E-02
50	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.32E-02
51	GO:0008168: methyltransferase activity	2.60E-02
52	GO:0005524: ATP binding	3.38E-02
53	GO:0004871: signal transducer activity	3.66E-02
54	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.74E-02
55	GO:0004722: protein serine/threonine phosphatase activity	3.78E-02
56	GO:0016787: hydrolase activity	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0009986: cell surface	6.66E-04
2	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	7.68E-04
3	GO:0005811: lipid particle	8.71E-04
4	GO:0030176: integral component of endoplasmic reticulum membrane	1.84E-03
5	GO:0005783: endoplasmic reticulum	2.75E-03
6	GO:0000145: exocyst	4.06E-03
7	GO:0005887: integral component of plasma membrane	7.37E-03
8	GO:0009705: plant-type vacuole membrane	1.96E-02
9	GO:0005886: plasma membrane	2.26E-02
10	GO:0046658: anchored component of plasma membrane	2.39E-02
11	GO:0005773: vacuole	2.82E-02
12	GO:0005794: Golgi apparatus	4.36E-02
13	GO:0005737: cytoplasm	4.49E-02