Gene: AT2G45850
     


Gene description


TAIR ID: AT2G45850

Short description: AT hook motif DNA-binding family protein

Pathogen responsiveness: -0.21

General responsiveness: 1.24

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus


GO molecular function


DNA binding


Protein domain


PfamPF03479, Domain of unknown function (DUF296)
SMARTSM00384, AT_hook

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G41315

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Differentially expressed condition


21 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-1.554.89E-03
GSE17464Laer, controlLaer, Flg22 1 h-1.871.71E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.576.47E-07
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.576.92E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.543.06E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.851.87E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.281.49E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.963.11E-07
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.841.93E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.511.11E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.555.34E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.691.49E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.772.35E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.398.90E-13
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.893.82E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.018.27E-06
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.701.63E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.217.30E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.081.38E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.942.71E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.042.30E-03






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