GO Enrichment Analysis of Co-expressed Genes with
AT2G45850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0071482: cellular response to light stimulus | 5.72E-05 |
| 3 | GO:0070509: calcium ion import | 8.61E-05 |
| 4 | GO:0007263: nitric oxide mediated signal transduction | 8.61E-05 |
| 5 | GO:0045036: protein targeting to chloroplast | 1.03E-04 |
| 6 | GO:0006352: DNA-templated transcription, initiation | 1.22E-04 |
| 7 | GO:0080005: photosystem stoichiometry adjustment | 2.04E-04 |
| 8 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.04E-04 |
| 9 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.04E-04 |
| 10 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 3.42E-04 |
| 11 | GO:2001141: regulation of RNA biosynthetic process | 4.92E-04 |
| 12 | GO:0009152: purine ribonucleotide biosynthetic process | 4.92E-04 |
| 13 | GO:0046653: tetrahydrofolate metabolic process | 4.92E-04 |
| 14 | GO:0016556: mRNA modification | 4.92E-04 |
| 15 | GO:0031122: cytoplasmic microtubule organization | 6.55E-04 |
| 16 | GO:0071483: cellular response to blue light | 6.55E-04 |
| 17 | GO:0006085: acetyl-CoA biosynthetic process | 6.55E-04 |
| 18 | GO:0080110: sporopollenin biosynthetic process | 8.29E-04 |
| 19 | GO:0045038: protein import into chloroplast thylakoid membrane | 8.29E-04 |
| 20 | GO:0010190: cytochrome b6f complex assembly | 1.01E-03 |
| 21 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.01E-03 |
| 22 | GO:0042549: photosystem II stabilization | 1.01E-03 |
| 23 | GO:0016554: cytidine to uridine editing | 1.01E-03 |
| 24 | GO:0030488: tRNA methylation | 1.20E-03 |
| 25 | GO:1901259: chloroplast rRNA processing | 1.20E-03 |
| 26 | GO:0009658: chloroplast organization | 1.40E-03 |
| 27 | GO:0009645: response to low light intensity stimulus | 1.41E-03 |
| 28 | GO:0006400: tRNA modification | 1.41E-03 |
| 29 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.41E-03 |
| 30 | GO:0008610: lipid biosynthetic process | 1.63E-03 |
| 31 | GO:0032544: plastid translation | 1.86E-03 |
| 32 | GO:0009657: plastid organization | 1.86E-03 |
| 33 | GO:0000373: Group II intron splicing | 2.10E-03 |
| 34 | GO:0006098: pentose-phosphate shunt | 2.10E-03 |
| 35 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.35E-03 |
| 36 | GO:1900865: chloroplast RNA modification | 2.35E-03 |
| 37 | GO:0019538: protein metabolic process | 2.61E-03 |
| 38 | GO:0009073: aromatic amino acid family biosynthetic process | 2.87E-03 |
| 39 | GO:0009773: photosynthetic electron transport in photosystem I | 2.87E-03 |
| 40 | GO:0006415: translational termination | 2.87E-03 |
| 41 | GO:0006096: glycolytic process | 2.99E-03 |
| 42 | GO:0006629: lipid metabolic process | 3.01E-03 |
| 43 | GO:0006094: gluconeogenesis | 3.43E-03 |
| 44 | GO:0090351: seedling development | 4.03E-03 |
| 45 | GO:0009969: xyloglucan biosynthetic process | 4.03E-03 |
| 46 | GO:0010025: wax biosynthetic process | 4.34E-03 |
| 47 | GO:0009695: jasmonic acid biosynthetic process | 4.98E-03 |
| 48 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.98E-03 |
| 49 | GO:0031408: oxylipin biosynthetic process | 5.32E-03 |
| 50 | GO:0016998: cell wall macromolecule catabolic process | 5.32E-03 |
| 51 | GO:0009409: response to cold | 5.44E-03 |
| 52 | GO:0010584: pollen exine formation | 6.36E-03 |
| 53 | GO:0042391: regulation of membrane potential | 7.10E-03 |
| 54 | GO:0009741: response to brassinosteroid | 7.48E-03 |
| 55 | GO:0006814: sodium ion transport | 7.87E-03 |
| 56 | GO:0009646: response to absence of light | 7.87E-03 |
| 57 | GO:0009791: post-embryonic development | 8.26E-03 |
| 58 | GO:0071554: cell wall organization or biogenesis | 8.66E-03 |
| 59 | GO:0016032: viral process | 9.07E-03 |
| 60 | GO:0019761: glucosinolate biosynthetic process | 9.07E-03 |
| 61 | GO:0032502: developmental process | 9.07E-03 |
| 62 | GO:0071805: potassium ion transmembrane transport | 1.03E-02 |
| 63 | GO:0001666: response to hypoxia | 1.12E-02 |
| 64 | GO:0010027: thylakoid membrane organization | 1.12E-02 |
| 65 | GO:0009816: defense response to bacterium, incompatible interaction | 1.17E-02 |
| 66 | GO:0010411: xyloglucan metabolic process | 1.26E-02 |
| 67 | GO:0018298: protein-chromophore linkage | 1.35E-02 |
| 68 | GO:0009407: toxin catabolic process | 1.45E-02 |
| 69 | GO:0071555: cell wall organization | 1.52E-02 |
| 70 | GO:0009637: response to blue light | 1.60E-02 |
| 71 | GO:0009853: photorespiration | 1.60E-02 |
| 72 | GO:0006397: mRNA processing | 1.83E-02 |
| 73 | GO:0008283: cell proliferation | 1.92E-02 |
| 74 | GO:0010114: response to red light | 1.92E-02 |
| 75 | GO:0008152: metabolic process | 1.94E-02 |
| 76 | GO:0042546: cell wall biogenesis | 1.97E-02 |
| 77 | GO:0009644: response to high light intensity | 2.02E-02 |
| 78 | GO:0009636: response to toxic substance | 2.08E-02 |
| 79 | GO:0006855: drug transmembrane transport | 2.14E-02 |
| 80 | GO:0006364: rRNA processing | 2.37E-02 |
| 81 | GO:0006813: potassium ion transport | 2.37E-02 |
| 82 | GO:0009626: plant-type hypersensitive response | 2.79E-02 |
| 83 | GO:0009416: response to light stimulus | 3.12E-02 |
| 84 | GO:0009742: brassinosteroid mediated signaling pathway | 3.17E-02 |
| 85 | GO:0009058: biosynthetic process | 3.71E-02 |
| 86 | GO:0042744: hydrogen peroxide catabolic process | 3.92E-02 |
| 87 | GO:0006457: protein folding | 4.03E-02 |
| 88 | GO:0040008: regulation of growth | 4.34E-02 |
| 89 | GO:0006952: defense response | 4.44E-02 |
| 90 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.64E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0005048: signal sequence binding | 0.00E+00 |
| 3 | GO:0005222: intracellular cAMP activated cation channel activity | 0.00E+00 |
| 4 | GO:0001053: plastid sigma factor activity | 6.94E-06 |
| 5 | GO:0016987: sigma factor activity | 6.94E-06 |
| 6 | GO:0008568: microtubule-severing ATPase activity | 8.61E-05 |
| 7 | GO:0004321: fatty-acyl-CoA synthase activity | 8.61E-05 |
| 8 | GO:0030941: chloroplast targeting sequence binding | 8.61E-05 |
| 9 | GO:0005221: intracellular cyclic nucleotide activated cation channel activity | 8.61E-05 |
| 10 | GO:0050139: nicotinate-N-glucosyltransferase activity | 8.61E-05 |
| 11 | GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 8.61E-05 |
| 12 | GO:0008805: carbon-monoxide oxygenase activity | 2.04E-04 |
| 13 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 3.42E-04 |
| 14 | GO:0008864: formyltetrahydrofolate deformylase activity | 3.42E-04 |
| 15 | GO:0016149: translation release factor activity, codon specific | 4.92E-04 |
| 16 | GO:0008508: bile acid:sodium symporter activity | 4.92E-04 |
| 17 | GO:0001872: (1->3)-beta-D-glucan binding | 4.92E-04 |
| 18 | GO:0003878: ATP citrate synthase activity | 4.92E-04 |
| 19 | GO:0051861: glycolipid binding | 6.55E-04 |
| 20 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 6.55E-04 |
| 21 | GO:0004045: aminoacyl-tRNA hydrolase activity | 6.55E-04 |
| 22 | GO:0080032: methyl jasmonate esterase activity | 6.55E-04 |
| 23 | GO:0080030: methyl indole-3-acetate esterase activity | 1.01E-03 |
| 24 | GO:0004332: fructose-bisphosphate aldolase activity | 1.01E-03 |
| 25 | GO:0005242: inward rectifier potassium channel activity | 1.20E-03 |
| 26 | GO:0005261: cation channel activity | 1.20E-03 |
| 27 | GO:0004620: phospholipase activity | 1.41E-03 |
| 28 | GO:0043022: ribosome binding | 1.63E-03 |
| 29 | GO:0008312: 7S RNA binding | 1.63E-03 |
| 30 | GO:0004033: aldo-keto reductase (NADP) activity | 1.63E-03 |
| 31 | GO:0003747: translation release factor activity | 2.10E-03 |
| 32 | GO:0016207: 4-coumarate-CoA ligase activity | 2.10E-03 |
| 33 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.54E-03 |
| 34 | GO:0047372: acylglycerol lipase activity | 2.87E-03 |
| 35 | GO:0008378: galactosyltransferase activity | 3.15E-03 |
| 36 | GO:0016874: ligase activity | 3.38E-03 |
| 37 | GO:0008081: phosphoric diester hydrolase activity | 3.43E-03 |
| 38 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.43E-03 |
| 39 | GO:0005262: calcium channel activity | 3.43E-03 |
| 40 | GO:0008083: growth factor activity | 3.73E-03 |
| 41 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.73E-03 |
| 42 | GO:0030552: cAMP binding | 4.03E-03 |
| 43 | GO:0030553: cGMP binding | 4.03E-03 |
| 44 | GO:0031409: pigment binding | 4.34E-03 |
| 45 | GO:0051536: iron-sulfur cluster binding | 4.65E-03 |
| 46 | GO:0005216: ion channel activity | 4.98E-03 |
| 47 | GO:0015079: potassium ion transmembrane transporter activity | 4.98E-03 |
| 48 | GO:0030551: cyclic nucleotide binding | 7.10E-03 |
| 49 | GO:0050662: coenzyme binding | 7.87E-03 |
| 50 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 8.66E-03 |
| 51 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 8.84E-03 |
| 52 | GO:0004601: peroxidase activity | 9.57E-03 |
| 53 | GO:0016413: O-acetyltransferase activity | 1.08E-02 |
| 54 | GO:0051213: dioxygenase activity | 1.12E-02 |
| 55 | GO:0016168: chlorophyll binding | 1.17E-02 |
| 56 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.26E-02 |
| 57 | GO:0030247: polysaccharide binding | 1.26E-02 |
| 58 | GO:0015238: drug transmembrane transporter activity | 1.40E-02 |
| 59 | GO:0004871: signal transducer activity | 1.49E-02 |
| 60 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.60E-02 |
| 61 | GO:0003824: catalytic activity | 1.71E-02 |
| 62 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.76E-02 |
| 63 | GO:0004364: glutathione transferase activity | 1.86E-02 |
| 64 | GO:0004519: endonuclease activity | 1.91E-02 |
| 65 | GO:0005198: structural molecule activity | 2.08E-02 |
| 66 | GO:0003723: RNA binding | 2.64E-02 |
| 67 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.73E-02 |
| 68 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.85E-02 |
| 69 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.85E-02 |
| 70 | GO:0051082: unfolded protein binding | 3.04E-02 |
| 71 | GO:0019843: rRNA binding | 3.57E-02 |
| 72 | GO:0016829: lyase activity | 3.78E-02 |
| 73 | GO:0016740: transferase activity | 3.80E-02 |
| 74 | GO:0015297: antiporter activity | 4.34E-02 |
| 75 | GO:0008194: UDP-glycosyltransferase activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.98E-09 |
| 2 | GO:0009782: photosystem I antenna complex | 8.61E-05 |
| 3 | GO:0080085: signal recognition particle, chloroplast targeting | 2.04E-04 |
| 4 | GO:0009346: citrate lyase complex | 4.92E-04 |
| 5 | GO:0009570: chloroplast stroma | 6.06E-04 |
| 6 | GO:0030529: intracellular ribonucleoprotein complex | 9.13E-04 |
| 7 | GO:0046658: anchored component of plasma membrane | 1.16E-03 |
| 8 | GO:0031359: integral component of chloroplast outer membrane | 1.41E-03 |
| 9 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.86E-03 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.10E-03 |
| 11 | GO:0009535: chloroplast thylakoid membrane | 3.05E-03 |
| 12 | GO:0009941: chloroplast envelope | 3.34E-03 |
| 13 | GO:0030076: light-harvesting complex | 4.03E-03 |
| 14 | GO:0010287: plastoglobule | 4.25E-03 |
| 15 | GO:0009532: plastid stroma | 5.32E-03 |
| 16 | GO:0009707: chloroplast outer membrane | 1.35E-02 |
| 17 | GO:0016020: membrane | 1.64E-02 |
| 18 | GO:0043231: intracellular membrane-bounded organelle | 1.94E-02 |
| 19 | GO:0009536: plastid | 1.97E-02 |
| 20 | GO:0005618: cell wall | 2.73E-02 |
| 21 | GO:0005623: cell | 3.64E-02 |
| 22 | GO:0009579: thylakoid | 3.73E-02 |
| 23 | GO:0031225: anchored component of membrane | 4.84E-02 |