Gene: AT2G42300
     

Gene description


TAIR ID: AT2G42300

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -0.31

General responsiveness: -0.30

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G378653  

Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus


GO molecular function


DNA binding, transcription factor activity, sequence-specific DNA binding, protein dimerization activity


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


19 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h-1.605.38E-06
GSE17464Penta, controlPenta, Flg22 2 h-1.824.73E-07
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.646.21E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.918.74E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.049.62E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.936.87E-08
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.131.18E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.668.03E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.833.65E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.571.69E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.688.55E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.581.40E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.934.42E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.191.75E-14
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.475.59E-07
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.331.71E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.023.53E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.551.36E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.846.09E-03






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