Gene: AT2G40000
     

Gene description


TAIR ID: AT2G40000

Short description: ortholog of sugar beet HS1 PRO-1 2

Pathogen responsiveness: 0.93

General responsiveness: 1.82

Orthologous


Rice:

OS01G0855600  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


tryptophan catabolic process to kynurenine, defense response to bacterium, incompatible interaction, response to salicylic acid, response to oxidative stress


GO cellular component


mitochondrion, cytoplasm


GO molecular function


metal ion binding, heme binding, protein binding


Protein domain


PfamPF07014, Hs1pro-1 protein C-terminus
PfamPF07231, Hs1pro-1 N-terminus

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Differentially expressed condition


44 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.641.26E-03
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.123.95E-06
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.583.05E-02
GSE17464Laer, controlLaer, PstDC3000 12 h-1.603.02E-02
GSE17464Laer, controlLaer, Flg22 1 h1.857.26E-03
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.434.64E-04
GSE17464Penta, controlPenta, PstDC3000 12 h-1.877.50E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.591.63E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.716.72E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.631.19E-03
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.681.01E-08
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.862.63E-07
GSE2169Col, WT, waterCol, WT, chitin 30 min1.723.80E-07
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.401.19E-09
GSE2169Col, rre2, waterCol, rre2, chitin 30 min1.867.97E-08
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min2.601.98E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.403.83E-07
GSE37921Col, WT, controlCol, WT, CMV1.642.90E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.646.52E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.076.32E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.581.18E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.043.16E-09
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.528.98E-05
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.255.38E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h1.736.55E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.815.01E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h2.724.32E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.482.63E-09
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.561.85E-04
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.973.53E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.192.12E-07
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.576.40E-04
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h1.858.06E-05
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.854.55E-08
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h1.624.97E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.674.81E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.564.10E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.265.01E-04
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.661.67E-11
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h3.261.61E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.123.40E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min3.045.14E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h1.804.96E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min1.832.07E-02






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